Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03668 |
Symbol | |
ID | 6303713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 186096 |
End bp | 189401 |
Gene Length | 3306 bp |
Protein Length | 1101 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642637506 |
Product | alpha-amylase family protein |
Protein accession | YP_001911391 |
Protein GI | 188574462 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases [COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
TIGRFAM ID | [TIGR02456] trehalose synthase [TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTCGCCG ACCAGCGTTG GTACAAGGAC GCGATCATCT ACCAAGTGCA CGTCAAGTCG TTCTTCGACT CCAACGACGA TGGCATCGGC GATTTTCCCG GACTGATTTC CAAGCTGGAT TACATCGCCG AACTCGGCGT GGACACCATC TGGTTGTTAC CGTTCTACCC CAGCCCGCGC CGTGACGATG GCTACGACAT TGCCGAATAC ATGGCGGTGC ATCCGGATTA CGGCAGCATC GAAGATTTTG AACAGTTGGT CGCGCAGGCG CACGCGCGCG GTATCCGCAT CGTCACAGAG CTGGTGATCA ACCACACCTC GGATCAGCAT CCCTGGTTTC AGCGCGCACG CACTGCGCCA GCCGGCTCGC CCGGGCGCGA CTTCTACGTG TGGTCGGATA CCGATCAGGA GTACGAAGGC ACGCGGATCA TCTTCTGCGA TACCGAAAAA TCCAACTGGA CCTGGGATCC GGTGGCCGGG CAGTACTTTT GGCACCGCTT CTATTCGCAT CAGCCGGATC TGAACTTCGA TAACCCGGCC GTGCTGGAAG CTGTGCTGGA AGTGATGCGC TTCTGGCTGG ATCGCGGCGT GGATGGCCTG CGTCTGGATG CAGTGCCGTA TCTGATCGAA CGCGCCGGCA CCTCCAACGA AAATCTGCCG GAAACCCATG CCATTTTGCG CAAGATCCGC GCCACCCTGG ATGCCGAATA CCCGGACCGC ATGCTGCTGG CCGAAGCCAA CATGTGGCCG GAAGACACCC AGCAATACTT CGGCCAGAAC GCCGACGAAT GCCACATGGC ATTCCACTTC CCGCTGATGC CGCGCATGTA CATGGCAATC GCGCGCGAAG ACCGCTTCCC CATCACGGAC ATCATGCGCC AGACCCCGGA GATTCCCGAG AGCTGCCAGT GGGCGATATT CCTGCGCAAC CACGATGAGT TGACCCTGGA AATGGTCACC GATTCGGAAC GCGATTATCT GTGGCAGACC TATGCCGCCG ATCGCCGCGC GCGTATCAAT CTGGGTATCC GCCGCCGCCT GGCGCCGTTG CTGGAGCGCG ACCGCCGCCG TATCGAGTTG ATGACCTCGT TGTTGCTGAC CATGCCTGGC ACGCCGGTGC TGTATTACGG CGACGAAATC GGGATGGGCG ACAACATCCA TCTGGGCGAC CGCGATGGCG TGCGTACGCC GATGCAGTGG TCGATCGACC GCAACGGCGG CTTTTCCCGT GCCGACCCAG CGCAGCTGGT GCTACCACCG GTGATGGACC CGCTGTACGG CTTCCAGGCG GTGAATGTGG AAGCGCAGAT CCGCGACCAG CATTCACTGC TGACCTGGAC GCGCCGCGTG CTCAGCGTGC GCAAGCGCTA CCAGGCCTTC GGCCGCGGGA CGCTGCGGTT CCTGTATCCG GGCAACCGCC GCATGCTTGC GTACCTGCGC TGTTATCAGG ACGAAACCGT GCTGTGTGTG GCCAATCTCT CGCACACGCT ACAAGCGGTA GAACTGGATC TGTCCGAGTT CGAAGGGCGC GTGCCGGTGG ACATCATCGG CGGCGGCAGC TTCCCGCCGA TCGGGCGGCT GACCTACCTG CTCACGGTGC CGCCGTTCGG CTTTTATGCG TTCGAGCTGG TGAGCGAAGG CACCTTGCCG GATTGGCATG TGCCCAGCCC GGTGCCGTTG CCGGACTACC GCACGCTGGT GCTGCGCAGC GATGCCGACG GAAGTGCGGC GCTGCTGCCG CATTTGCCTA CGTTGGAAGG CGAAATCCTG CCGGCATGGC TGTCGGCACG GCGCTGGTTT TCAGCCAAGG ATCAGGCGCT GCGCAGTGTG CGCATCGCGC GTCGCACACC GCTGCCGGGC GACCAACCGA TGACGCTGCT GGAGCTGGAG GTGGAGCTGG AGGACGGCCG CCGCGAGCGC TACATGTTGC CGGTGGGCAT CGTGTGGGAG CGCGAGCAAC CCAGCACGCT GGCTGAGCAG CTGGCGCTGG CGCGCGTGCG TCAAGGACGC GAGGTGGGCT ACCTGACCGA CGCGTTTGCG CTCAAGCCGA TGGTACGCGG CGTGATCGAT GCGCTGTGCA GCAACGCAGC GCTAAAGTTC TGCGATGGCG AGGAGGCATC GCAACAAGGC CAGGTACGTT TCGAAGCCAC CCCGGCGCTG GCGATGCTGG ATATCCCGCA CGACCCGGAG ATCCGCTGGT TGTCGGCCGA ACAGAGCAAC AGCTCGCTGG TGATCGCCGA CAAGGCCGTG TTCAAGCTGC TACGGCACGT TGCGGTGGGC GCGAACCCGG AGATCGAAAT CGGCCGCCGG TTGACCGAGA TGGGCTACGC CAACGCCGCG CCGCTGCTGG GCAGCATCAG CCGCGTCGAC GGGCAGGGCA CGGTCACCAC CATCGCGTTG TTGCAGGGCT TCATCCGCAA TCAAGGCGAT GCGTGGCGCT GGACGCTCGA CCATCTGGCA CGTAGCTTCG ACGAATACGT CACCGCGCAG ACAGACGAAG CGCGCGCCGA AGCCGTCGCT GGCTATGACG CGTTCGCTGC CGTGGTTGGC ACGCGCCTGG CCGAGCTGCA TGAAGCGCTC GCGCGCGATA CCGACGATGC CGATTTCGCA CCACAACGTA TCGACCTGCC TACCGCCAAC GATGTGGTGG CCGGTGTGGG GCGTCAGGTG GAAGCGATGT GGGACACCGT CAATGCGCGC CTGGCTGGCA GCGAAGACAG CGCCGAACGC GAGGCGCTGG AGGCGGTGCT GGCCGAACGC CCGCAGCTGG ATGCCCTGCT TGCCAAGGCG CCAAGCGTGC TCGCCGATTC GTTGCTGACG CGCGTGCACG GCGACTTCCA CCTGGGCCAG ATCCTGGTCG CGTTCGACGA TGTGGTGCTG ATCGACTTCG AGGGCGAGCC GGCCAAGCCG CTGGCCGAGC GCCGCGCCAA GGCCAGCCCG CTGCGCGATG TGGCTGGCTT CCTGCGCTCG CTCGATTACG CCAGCGAAGT GTCGGCACGT GGCGAGGAGG GCACGACCGC ACGCGCCGGG GTGGGCGTGG ACGCGCATCT GGACGCATTT CTGGTGCAAT TCCGCCGCCG CTCCACATGG GCCTTCCTGG ACGCTTACCA TGCCGTGCTC GACGCCAGCG CCCATCCGTG GATTGCGCCG GCGGCGTTCA ACGCAGCCAT CTTGTTGTTC CTGGTGGAAA AGGCTTGCTA CGAAGTGCGT TATGAAGCCG CCAATCGTCC TGGCTGGTTG ATGGTGCCGA TCGAAGGCTT GCGACGCATC CTGCAACGCG CTCGCGCCGG TGCAGGGGAC ATATGA
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Protein sequence | MVADQRWYKD AIIYQVHVKS FFDSNDDGIG DFPGLISKLD YIAELGVDTI WLLPFYPSPR RDDGYDIAEY MAVHPDYGSI EDFEQLVAQA HARGIRIVTE LVINHTSDQH PWFQRARTAP AGSPGRDFYV WSDTDQEYEG TRIIFCDTEK SNWTWDPVAG QYFWHRFYSH QPDLNFDNPA VLEAVLEVMR FWLDRGVDGL RLDAVPYLIE RAGTSNENLP ETHAILRKIR ATLDAEYPDR MLLAEANMWP EDTQQYFGQN ADECHMAFHF PLMPRMYMAI AREDRFPITD IMRQTPEIPE SCQWAIFLRN HDELTLEMVT DSERDYLWQT YAADRRARIN LGIRRRLAPL LERDRRRIEL MTSLLLTMPG TPVLYYGDEI GMGDNIHLGD RDGVRTPMQW SIDRNGGFSR ADPAQLVLPP VMDPLYGFQA VNVEAQIRDQ HSLLTWTRRV LSVRKRYQAF GRGTLRFLYP GNRRMLAYLR CYQDETVLCV ANLSHTLQAV ELDLSEFEGR VPVDIIGGGS FPPIGRLTYL LTVPPFGFYA FELVSEGTLP DWHVPSPVPL PDYRTLVLRS DADGSAALLP HLPTLEGEIL PAWLSARRWF SAKDQALRSV RIARRTPLPG DQPMTLLELE VELEDGRRER YMLPVGIVWE REQPSTLAEQ LALARVRQGR EVGYLTDAFA LKPMVRGVID ALCSNAALKF CDGEEASQQG QVRFEATPAL AMLDIPHDPE IRWLSAEQSN SSLVIADKAV FKLLRHVAVG ANPEIEIGRR LTEMGYANAA PLLGSISRVD GQGTVTTIAL LQGFIRNQGD AWRWTLDHLA RSFDEYVTAQ TDEARAEAVA GYDAFAAVVG TRLAELHEAL ARDTDDADFA PQRIDLPTAN DVVAGVGRQV EAMWDTVNAR LAGSEDSAER EALEAVLAER PQLDALLAKA PSVLADSLLT RVHGDFHLGQ ILVAFDDVVL IDFEGEPAKP LAERRAKASP LRDVAGFLRS LDYASEVSAR GEEGTTARAG VGVDAHLDAF LVQFRRRSTW AFLDAYHAVL DASAHPWIAP AAFNAAILLF LVEKACYEVR YEAANRPGWL MVPIEGLRRI LQRARAGAGD I
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