Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03648 |
Symbol | |
ID | 6303734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 212508 |
End bp | 214394 |
Gene Length | 1887 bp |
Protein Length | 628 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642637525 |
Product | arginine decarboxylase |
Protein accession | YP_001911410 |
Protein GI | 188574481 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGATT GGTCCCTCGA CCAAGCCCGC AAGACCTATT CGATCCCGCA TTGGGCCGAC GGGTATTTCG ATGTGAATGC TGCCGGACAC GTGGTGGTCA CCCCGACCGC CGATGGCCCG GCGGTGTCGC TGCCCGAGGT GGTGGATGCC GCGCGCGCGG CCGGCGCCAA GCTGCCGCTG CTGGTGCGTT TCCCGGACAT CCTGGGCCAG CGCCTGGGCA AGCTGCAGGC AGCGTTCGCG CAGGCGCAGT CCGAATGGGA TTACGCCGGC GGCTACACGG CCGTGTATCC GATCAAGGTC AACCAACACC GCGGCGTGGC CGGCACCCTG GCCAGCCATC ATGGCGACGG TTTCGGCCTG GAAGCGGGCA GCAAGCCGGA GCTGATGGCG GTGCTGGCGC TGTCGCGTCC GGGCGGGCTG ATCGTCTGCA ACGGCTACAA GGACCGTGAA TACATCCGCC TGGCGCTGAT CGGGCGCAAG CTCGGCCTGC AGACCTTCAT CGTCATCGAA AAGCCTTCCG AACTGAACTT GGTGTTGGAA GAAGCGCGCG CGCTGGACGT CAAGCCAGGC TTGGGCGTGC GCATGCGCCT GGCTTCGCTG GGTGCGGGCA AGTGGCAGAA CAGTGGGGGC GACAAGGCCA AGTTCGGTCT CTCGCCACGC CAGGTGCTGG ACCTGTGGAA GACGCTGCGC GACACCGAAT ATGCCGACAG CCTGAATCTG CTGCATTTCC ATATGGGCTC GCAGATCTCC AATGTGCGCG ACATCGCCAA CGGCATGCGC GAAGCCACGC GCTATTTCGT GGAGCTCTCG CGGCTGGGCG CGAAGATCAG CCATGTGGAT GTGGGCGGCG GCCTGGGCAT CGACTACGAA GGCACGCGCT CGCGCAGCTA TTGCTCGATC AACTACGGCC TGCACTCGTA CGCCAGCAAT ATCGTGCAGC CGCTGGCCAG CGCCTGCGAA GAACACGGCC TGGCCCCGCC GCGCATCGTC ACCGAATGCG GGCGCGCGAT GACCGCGCAC CACGCGGTGC TGATCGCCAA CGTCTCGGAA GTGGAGCAGG CGCCCGAAGG CCGCGTGCCG GACGCGCACG CCGACGAACC GGCGGCGATC CGCCACCTGC GCGAGATCCA TGACGAGCTC GATGTGCGCC CGGCAGTGGA ACTGTTCCAG GAAGCGCAGC ACTTCCATGC CGAAGGCTTG AGCGCCTATG CACTGGGCCA GATCGACCTG ACCCACCGTG CACGCATCGA CGATTTGTTC TATGCCATTG CCCACGGCGT GCGTGCGCGC CTGAGCTTCG ACGAGAAGAG CCATCGCCCG GTGCTGGATG AGCTCAACGA GCGGCTGGTG GACAAGTATT TCGTCAACTT CAGCGTGTTC GAGTCGATCC CGGATGTGTG GGCGATTGAT CAGGTGTTCC CGATCGTGCC GATCGAGCGC TTGAACGAAG CGCCGCAGCG GCGCGGCATC ATCGCCGATA TGACCTGCGA TTCCGACGGC ATGGTCAAGA CCTATGTCGA GAACGAAAGC CTGGACAGCT CGTTGCCGCT GCACAGCTTG AATGCCGGTG AGAGCTATCG CATCGGCTTC TTCCTGGTCG GTGCCTACCA GGAAATCCTG GGCGATATCC ATAACCTGTT CGGCGATACC GATGCGGTGG AAGTGGCGGT GGATGGCGAT GGCTATCGCA TCGCGCAGCA GCGCCGCGGC GATACCACCG ACGTGATGCT GGATTACGTG GGCTACCAAC TGGCCACGCT GCGTGCCACC TATGCCGAGC GCATCGCTGC CGCGCAACTG CCACCCGAGC GCGCGCATGA ACTCAGCGCT GCGTTGGAAG CGGGCCTGAC CGGCTACACC TATCTGTCCG ACGAACCGTT GGGCTGA
|
Protein sequence | MSDWSLDQAR KTYSIPHWAD GYFDVNAAGH VVVTPTADGP AVSLPEVVDA ARAAGAKLPL LVRFPDILGQ RLGKLQAAFA QAQSEWDYAG GYTAVYPIKV NQHRGVAGTL ASHHGDGFGL EAGSKPELMA VLALSRPGGL IVCNGYKDRE YIRLALIGRK LGLQTFIVIE KPSELNLVLE EARALDVKPG LGVRMRLASL GAGKWQNSGG DKAKFGLSPR QVLDLWKTLR DTEYADSLNL LHFHMGSQIS NVRDIANGMR EATRYFVELS RLGAKISHVD VGGGLGIDYE GTRSRSYCSI NYGLHSYASN IVQPLASACE EHGLAPPRIV TECGRAMTAH HAVLIANVSE VEQAPEGRVP DAHADEPAAI RHLREIHDEL DVRPAVELFQ EAQHFHAEGL SAYALGQIDL THRARIDDLF YAIAHGVRAR LSFDEKSHRP VLDELNERLV DKYFVNFSVF ESIPDVWAID QVFPIVPIER LNEAPQRRGI IADMTCDSDG MVKTYVENES LDSSLPLHSL NAGESYRIGF FLVGAYQEIL GDIHNLFGDT DAVEVAVDGD GYRIAQQRRG DTTDVMLDYV GYQLATLRAT YAERIAAAQL PPERAHELSA ALEAGLTGYT YLSDEPLG
|
| |