| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03634 |
|---|
| Symbol | |
|---|
| ID | 6303747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 232356 |
|---|
| End bp | 233234 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642637537 |
|---|
| Product | threonine dehydratase |
|---|
| Protein accession | YP_001911422 |
|---|
| Protein GI | 188574493 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1171] Threonine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTGACAT CGCACAGCCT GGATGCGCTC AGCGGTGCAC GGTTGTTCTT CAAGGCCGAA
CATCTGCAAC GCAGCGGGGC CTTCAAGTTC CGCGGGGCGT GCAATGCCGT GTGGTCGCTG
CCGGACGAGC GGACTGCACA TGGGGTAGTG ACGCATTCAT CCGGCAACCA CGGCGCGGCG
CTGGCGCTGG CCGCACGCAC GCGTGGCATG GGTTGCCATG TGGTGGTGCC CGAAGGCGCG
GTGGCGGCCA AGCTGGCCAA TATTTCCCGG CATGGCGCCA CCTTGTGGCG CTGCGCACCG
ACCATCGCAG CGCGTGAACA GCTATGCGCC GAGGTGCAGG CCAGCAGCGG TGCCACGCTG
GTGCACCCGT ATACCGATGT CGCGGTCATC GCCGGCCAGG GGACGGCCAC GCTGGAGCTG
CTGCATCAAA GCGGTGGCCT GGACGTGCTG GTGGCGCCGG TCGGCGGTGG CGGGTTGGCG
GCCGGTGCCG CGCTGGCGCT GCGCTGCGCA CCCGGCTGCG AGCTGGTGCT GGCCGAGCCG
GCCGGCGCAG CCGATACCGC GCGTTCGTTG GCGGCAGGCC AGCGGCTGGT CGATTTTGTG
CCGGACACTG TGTGCGATGG TCTGCGCGGC ACCTTGGGCG CGCCCAATTT CGCGCTGCTG
CAGCACGCCG GCGCGCAGGT GATCACAGTC GACGATGCCG CGGTCGTCCA GGCGATGCGG
CTGATCTGGC AGTTGCTCAA ACAAGTGGTC GAGCCGTCTT CGGTGATCAC CCTGGCCGCG
GTGCTGGCCG AGCCGGCACG GTTTGCCGGG CGCCGGGTGG GCTTGATCCT GTCTGGTGGC
AATGTCGATC TGGATGCCTT GCCATGGGCC GCGGCGTGA
|
|---|
| Protein sequence | MLTSHSLDAL SGARLFFKAE HLQRSGAFKF RGACNAVWSL PDERTAHGVV THSSGNHGAA
LALAARTRGM GCHVVVPEGA VAAKLANISR HGATLWRCAP TIAAREQLCA EVQASSGATL
VHPYTDVAVI AGQGTATLEL LHQSGGLDVL VAPVGGGGLA AGAALALRCA PGCELVLAEP
AGAADTARSL AAGQRLVDFV PDTVCDGLRG TLGAPNFALL QHAGAQVITV DDAAVVQAMR
LIWQLLKQVV EPSSVITLAA VLAEPARFAG RRVGLILSGG NVDLDALPWA AA
|
|---|
| |