| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03590 |
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| Symbol | |
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| ID | 6303791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 279410 |
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| End bp | 280879 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642637580 |
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| Product | ABC transporter amino acid permease |
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| Protein accession | YP_001911465 |
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| Protein GI | 188574536 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component
[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.129314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGTG CGCTCATCGC TGCGATGTTG CTAATCTGCA GCCTTGCCGC ACACGCAGCG
CAAGTCACTA TCGGCTCGAA GAACTTCACA GAAGCGGTGA TCCTGGGCGA CATCGCCACC
GCCGCCGGCA AGCGCGATGG CGTGGATGTG CAGCACCGCG CCCAACTCGG TGGCACGCGT
ATCCTGTGGC GCGCGTTGCA GACCGGGCAG ATCGACGCGT ATGCCGAATA CACCGGCACG
CTGGCGCAGG AACTGCTGCA ACTGCCCACC GCCAGCCAGG CCGAACTGCG TGCAGCACTC
GACGCGCGCG GGCTGGCGAT GACCGATTCG CTGGGTTTCC AGAACACCTA CGCATTCGGT
ATGCGGCGCG AACGTGCGCA GGCGTTGGGC ATCGTCTCGC TGTCGGATTT TGCGCGGCAT
CCCACGCTTA AGATCGGTCT GAGCAACGAA TTCATGCAGC GTGCCGATGG CTGGCCGGGT
GTGCGTGCGG CGTACGCGCT GCCGCAAACC GCAACCGGGC TGGATCACGA CTTGGCCTAT
CGCGCGCTGC AGAACGGTGC GATCGAAGTC ACCGATCTGT ACAGCACCGA TGCGGAAATT
CCGTATTACC AACTGCAGGT GCTGCGCGAC GACCGCCACT ATTTCCCCGA TTACCAAGCG
ATTTTTTTAT ATCGCAAGGA TCTGGCGCAA CGCTCGCCGG CAATGTTGCA GGCTTTGCAG
GGGCTGCAAG GGCGCATCGA TGAAGCCACC ATGCAGCGGC TCAACGCGCA GGTAAAACTG
GAGCGGCAGT CCGAAGCGGC GGTTGCCGCG CATTGGTTGG GCCTCACGCC GGCCTCTGAA
ACGGATTCGC GTGTGGCGCG CTTGCTTCGG TATACGCGCG AGCATCTGGC GTTGGTCGGC
ATTTCGCTGG GGCTGGCGTT GCTGCTTGCG CTGCCGCTGG GTGTGCTGGC AGCGCGGCGT
CCACGCCTGG GGCAGGTGGT GTTGTCCTTG ACCGGTGTGC TGCAGACGCT GCCGTCGCTG
GCCGTGTTCG TTTTCATGAT TCCGTTGTTC GGTATCGGCG CCAAACCAGC GATTGCCGCG
CTGTTTCTGT ATAGCCTGCT GCCGATCGTA CGCAATACCC ACGCTGGGCT GACCTCGATC
CCGCGCGAGC TGCGCCAGAC CGCGCACGCG ATTGGGTTAC CGGCGTGGAC GCGCCTGTGG
CGTGTGGAAC TGCCGCTGGC CCGCCGCACG ATTGTGGCCG GCATCCAGAC TGCCGCGGTG
ATCAATGTGG GTACCGCCAC GCTGGGCGCG TTGATCGGCG CAGGCGGCTA CGGTCAGCCG
ATTCTCACTG GCATCCGCCT CGACGATCTC GGCTTGATTT TGGAAGGCGC CCTTCCCGCC
GCCGTGCTGG CACTGCTGGT GCAGGCGGCG TTCGAAGGAC TGGAGCGCTG GGCGACGCCG
CGCGGGTTGC GGATCAGTCA GCGGCAGTGA
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| Protein sequence | MARALIAAML LICSLAAHAA QVTIGSKNFT EAVILGDIAT AAGKRDGVDV QHRAQLGGTR
ILWRALQTGQ IDAYAEYTGT LAQELLQLPT ASQAELRAAL DARGLAMTDS LGFQNTYAFG
MRRERAQALG IVSLSDFARH PTLKIGLSNE FMQRADGWPG VRAAYALPQT ATGLDHDLAY
RALQNGAIEV TDLYSTDAEI PYYQLQVLRD DRHYFPDYQA IFLYRKDLAQ RSPAMLQALQ
GLQGRIDEAT MQRLNAQVKL ERQSEAAVAA HWLGLTPASE TDSRVARLLR YTREHLALVG
ISLGLALLLA LPLGVLAARR PRLGQVVLSL TGVLQTLPSL AVFVFMIPLF GIGAKPAIAA
LFLYSLLPIV RNTHAGLTSI PRELRQTAHA IGLPAWTRLW RVELPLARRT IVAGIQTAAV
INVGTATLGA LIGAGGYGQP ILTGIRLDDL GLILEGALPA AVLALLVQAA FEGLERWATP
RGLRISQRQ
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