| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03577 |
|---|
| Symbol | |
|---|
| ID | 6303804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 294557 |
|---|
| End bp | 296548 |
|---|
| Gene Length | 1992 bp |
|---|
| Protein Length | 663 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642637593 |
|---|
| Product | cardiolipin synthase |
|---|
| Protein accession | YP_001911478 |
|---|
| Protein GI | 188574549 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGGCAA CGGTGTTGCT CGGCACCGGA TGCGCCAGCC TGTCGCAAAC CGAACGCAAC
CGTGCTGCCG GCGTCGCCGC TGCGGCACGC AGTACCGTGG TGAATTGCAC CCAGGCCAAT
CGTTGCGCGC AACCTTCGCC GCTGCGCGCG CTGGGCGGCG AGGCGATCAC CGCCTCCACA
CCGGCGGCGC CGCGGCACTA CGCCACCATC GTCGACCACG GCGAAGAATC GCTGGTGGCT
CGGCTCAATC TGATCCGCAG CGCTACCCGC AGCATCGACC TGCAGACCTA TATCTTCGAC
AAGGACGACA GCGCGCGCAT GATCATGGAC GCGCTGATGG ACGCCGCGCA ACGCGGCGTC
AAGGTGCGCA TCCTGATCGA TCAGCTGTCG GCGATCGCCG ATCTGCAGAT TCTCGGTGCG
CTGGCCAGCA GCCACGAAAA CCTGCAGCTG CGCATCTACA ACCCCACCTT CGGCAAGGTC
AAACTCAACT ACTTCGACTA TGCCGGCAGT GTGCTGTGCT GCTTCCGTCG CTTCAATCAG
CGCATGCACA ACAAGCTGTT GGTGGTGGAC GACGTGCTCG GTGTGGTCGG CGGGCGCAAT
TACCAGGACG ACTATTACGA GTGGGACAGC GAGTACAACT TTCGCGACCG CGACGTGATT
CTGGCCGGTC CGGAAGTTCG TGCGATGGCC GCTAATTTCG ATGCGTTCTG GCGTGCCCGG
CGCAGTGTGC CGGCCGAGCG TTTGAACGAT GTCGGGCGCG TGCTGCTGGA GCAGGGCGTA
CCGCAGATGC CGCCAGCGAA CTTCCGCCGG CCCGACCGGG TGGCGCGTGT GGATCGCGAA
GCGCGCGATC CGCAGTTCGT ACGCGATGCC TTCGTGACCC CGGCCATGCC GGTGCAGCGT
GTGCTGTATG TGGCCGATCT GCCGCAAAAG CACCGCAAGG AACATGCTGC CAAGGCGGTT
TCCACGGCGC CGGAACTGGA TGGCCTGATT GCCGGCGCGC AGCAGGAAGT GCTGCTGCAG
ACGCCGTATC TGGTGTTGTC CGACGCGGCG CAGGCGATCT TTCGCACGCT GCGCACGCAC
CCGCAGCCGC CGCGCATCGT GGTGTCGACC AATAGCCTGG CCGCCACCGA CAATCCCATC
GTGTATGCGC TGTCGTACAA GTTCAAACGC CGCAACATGC GCGAGCTGGG CTTCAACATC
TACGAGTTCA AGCCGTTCCC GCTCGATGTT CCGGTGGATT ACGCCAACCT GGTGCCGGAT
ACACTCAACC CTGCTTCCGA CATCAACGAA GACAGCCGCA CCAATCGCCT GATCGGCGGC
AGTGCGGCCG GCAATGCGAT GCGCGGCAGC AGCGGTGCAG ACGGGAACAC AAGCGCACGT
GCTGGCAGCG TGCTACGCGG CAGCGGTGGC CGCGCGCCGG GCGGTAGCGA GGTTGATCGG
CGCGTGCTGC GTACCGAAAC GAGACCCTCG TTCCTGGGCA CGCGTGCGGT CAACAAGCCG
CTGCCGGTGA CCCGCGCCGG TGCGCGCATG GGCTTGCATG CCAAGTCGCT GGTGGTGGAT
CGCCGCATCG GCGTGATCGG CACGCACAAC TTCGACCCGC GCAGCGAGAA CTACAACACC
GAAGCGGCCG TGGTGATCGA CGACGCGCGC TTTGCGCAGG CGCTGGCCGC CAGCATCGAA
CGCGATATGT CGCCGGAAAA CGCCTGGACG GTGGCCCCGC GCGAAAAGCC GCCGATGTTG
AGCGGATTGA ACTACAGCGT GGGTAAAGTT TCCGAAGCCT TGCCGGTGCT GGACTTCTGG
CCGTGGCGCT ACGCCACCAA TTACGAGTTC CAGCCCGGCC CGGATTGCTT GTTCCCGCTC
AAGCGCCAGG ATACGCAGTT CCGTAAGTGC TACGTCGCGG TGGGCGACTT CCCGGAGGTC
AATGTCGGCC CGAAGTGGCT TTTGGTACGC ATGCTCACCG CCTTCGGCGC CGGGCTGGTG
CCGATTCTTT GA
|
|---|
| Protein sequence | MLATVLLGTG CASLSQTERN RAAGVAAAAR STVVNCTQAN RCAQPSPLRA LGGEAITAST
PAAPRHYATI VDHGEESLVA RLNLIRSATR SIDLQTYIFD KDDSARMIMD ALMDAAQRGV
KVRILIDQLS AIADLQILGA LASSHENLQL RIYNPTFGKV KLNYFDYAGS VLCCFRRFNQ
RMHNKLLVVD DVLGVVGGRN YQDDYYEWDS EYNFRDRDVI LAGPEVRAMA ANFDAFWRAR
RSVPAERLND VGRVLLEQGV PQMPPANFRR PDRVARVDRE ARDPQFVRDA FVTPAMPVQR
VLYVADLPQK HRKEHAAKAV STAPELDGLI AGAQQEVLLQ TPYLVLSDAA QAIFRTLRTH
PQPPRIVVST NSLAATDNPI VYALSYKFKR RNMRELGFNI YEFKPFPLDV PVDYANLVPD
TLNPASDINE DSRTNRLIGG SAAGNAMRGS SGADGNTSAR AGSVLRGSGG RAPGGSEVDR
RVLRTETRPS FLGTRAVNKP LPVTRAGARM GLHAKSLVVD RRIGVIGTHN FDPRSENYNT
EAAVVIDDAR FAQALAASIE RDMSPENAWT VAPREKPPML SGLNYSVGKV SEALPVLDFW
PWRYATNYEF QPGPDCLFPL KRQDTQFRKC YVAVGDFPEV NVGPKWLLVR MLTAFGAGLV
PIL
|
|---|
| |