Gene PXO_03560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_03560 
Symbol 
ID6303822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp313943 
End bp314968 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content63% 
IMG OID642637611 
ProductISXo5 transposase 
Protein accessionYP_001911496 
Protein GI188574567 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.81013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGCCAG TGAGAGCCGA CCGGTCGATG CTAGGACCGT CGCTCCACCG AGACCAGATC 
ATGGCCATGA ATCGTGTGCA GTTCCAAGCC GGGCTGTCGT TGCCGGCGTT CCTCAAGCGC
TATGGCAACG CGCAGCAGTG CGAGCAGGCG TTGGAGATCT CGCGCTGGCC ACAGGGCTTT
GTTTGTCCGC GTTGCGCCGC TAACGCGCAC AGTCGATTCC AGCGTCAAGG CACCACGTAC
TGGCAGTGCA CGGCCTGCTA TCGCCAGACC AGCCTGCGCT CGGGCACGGT GATGGACAAC
AGCAAGCTGC CGCTACGCAC CTGGCTGCTT GGCATGTATC TGCTGGGCCA GAGCAAGACG
AACCTGTCGG CGCTGGAGTT GATGCGACAC CTGGGAGTGA GCTACCCGAC AGCGTGGCCA
ATGAAGCACA AGCTGATGCA GGCCATGACC CAACGCGAGG CGAACCGCAA GTTGGGCGGG
ATCGTGCAAC TGGACGATGC CTACCTGGGC GGAGAACGCA ACGGTGGCAA GGCCGGGCGC
GGCTCGGAGA ACAAGCGCCC TTTCGTGATC GCCGTGGAGA CCACTGAAGA CGGTCGTCCA
TTGCGCGCGG TGATGGATCC GGTCCCAGGC TTCACCAAGG CGGCGCTGTC GGAATGGATC
GGGCAACGCC TGCATCCTGG AGCAGATGTC TACAGTGATG GACTCGGTGC GTTTCGAGCA
CTGGAAGCCG AGCACGCGCA CACGGTGATC GAAGGCAGCG GTCGAAGTCG CTGCGAGGCA
GAGAACGCAC GCTGGGTCAA CGTGGTGTTG TCCAACCTAA AGCGTTTGCT GGACGGTGCC
TATCACGCCT TCAAATTCGC CAAATACGCC CAGCGCTACC TGGCAGAGAC GATGTGGCGG
TTCAACCGCC GTTTCGATCT GACCCGGCTG GTGCCCAGCT TGCTGGCCGC CGCAGCCGCC
AGCAAGCCGT GGTCCGAGCG GGCCCTGCGT GATGTCACCC TGTTCACCGC TGAAAGTGCG
TGCTAA
 
Protein sequence
MQPVRADRSM LGPSLHRDQI MAMNRVQFQA GLSLPAFLKR YGNAQQCEQA LEISRWPQGF 
VCPRCAANAH SRFQRQGTTY WQCTACYRQT SLRSGTVMDN SKLPLRTWLL GMYLLGQSKT
NLSALELMRH LGVSYPTAWP MKHKLMQAMT QREANRKLGG IVQLDDAYLG GERNGGKAGR
GSENKRPFVI AVETTEDGRP LRAVMDPVPG FTKAALSEWI GQRLHPGADV YSDGLGAFRA
LEAEHAHTVI EGSGRSRCEA ENARWVNVVL SNLKRLLDGA YHAFKFAKYA QRYLAETMWR
FNRRFDLTRL VPSLLAAAAA SKPWSERALR DVTLFTAESA C