Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03551 |
Symbol | |
ID | 6308591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 5175947 |
End bp | 5177287 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642642304 |
Product | outer membrane protein |
Protein accession | YP_001916129 |
Protein GI | 188579200 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2067] Long-chain fatty acid transport protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTACCG CTTCCATTCT CAGCCGCGCC ACCCTGCTGG CCGTCGGTAT CGCCGGCGTG CTGGCCGTTG GTCAGGCGCA CGGCGCCGCG TTCCAGCTGA AGGAAAACAG CGCCAAGGGC CTCGGCCGCG CCTTCGCAGG TTCGGGCAGC GCCCCGGACG ATGCCTCCAT CATGGTCAAC AACCCGGCCG GTATGCGCCA GTTGGACGGT CGCCTGTTCC AGGCCGACGT CAGCGCCATC AGCTTCTCGG CCAGGTTCCA GCCTGAGTCG GCCAACTACG CCAACGGCGC CCCGGTCTCC GGCGGTAACG GCGGCGATGC CGGCATGATC GCGCCGGTGC CGGCGATGTA CTTCCACGTG CCGTTCGGCG AGAACGACAA CATGCACCTG GGCACCTCGC TGACCGTGCC GTTCGGCTTC AAGACCGAAT ACGACCGCGA CTGGGTCGGC CGCTACCACG GCACCAAGAC CGAGCTGCAG GCGATCGACT TCAACGTCGC GTTCTCCTAT GACGTGAACC CGTACGTGTC CTTCGGCGCC TCGGTGTTCG CCGAGCGTCT GGATATCGAC CTGGCCAACG CCGTCGATTT TGGCAGCGTG CTGGCTGCGC GCCGCGTGCC GGGCTTCGCG CCGGGCAGCG CCGATGGCTA CTCGCGCATC AAGGGCGACA GCACTGAAGT GGGCTTCACT CTGGGTGGCT TGTTCAGCAT CGATGAGAAC ACCCATATCG GCTTCAGCTA CCGCTCGCAG GTGGAACACA AGATCACCGA TGGCACTGCC GACTTCACCG TGCCGGGCAG TGCTGCCGCG GTGCTGAGCG TGGCCGCACC GGGCACCTTC GTCGACACCA AGGGCCGCGC TACCGTCAAG CTGCCGGCCA GCGCGACCGC CAGCTTCACG CACAACGTGA ACGAGCAGTG GTCGATCATG GCCGACGTCA CCCGCACCGC CTGGAGCAAG TTCGACCAGG TGACCGTGGA CTTCGCCTCC AACCAGCCCG ACAGTGTGCT GGACTTCTCC TACCGCGACA CCACCTTCGC CTCGATCGGT GCCGATTACC GCATGAGCGA TACGGTGACC CTGCGCGGCG GCCTGGCATA CGACCAGACC CCGACCACGG CCGAACACCG CGACGTGCGC GTGCCGGACG CGAGCCGCAA GTGGGTTTCG CTGGGTATGA GCTGGCGTCC GTCGGCGCAG ACCGAATACA ACGTCGGTTA CACCCACCTG TTCACCAACA ACCCGACCAG CGATACCCGC AGCGCCACCG GCGACCGTCT GGCTGGCAGC TATGACGTGA AGGGCGACGT GCTGGCCGCG TCGATCAACT ACAAGTTCTG A
|
Protein sequence | MSTASILSRA TLLAVGIAGV LAVGQAHGAA FQLKENSAKG LGRAFAGSGS APDDASIMVN NPAGMRQLDG RLFQADVSAI SFSARFQPES ANYANGAPVS GGNGGDAGMI APVPAMYFHV PFGENDNMHL GTSLTVPFGF KTEYDRDWVG RYHGTKTELQ AIDFNVAFSY DVNPYVSFGA SVFAERLDID LANAVDFGSV LAARRVPGFA PGSADGYSRI KGDSTEVGFT LGGLFSIDEN THIGFSYRSQ VEHKITDGTA DFTVPGSAAA VLSVAAPGTF VDTKGRATVK LPASATASFT HNVNEQWSIM ADVTRTAWSK FDQVTVDFAS NQPDSVLDFS YRDTTFASIG ADYRMSDTVT LRGGLAYDQT PTTAEHRDVR VPDASRKWVS LGMSWRPSAQ TEYNVGYTHL FTNNPTSDTR SATGDRLAGS YDVKGDVLAA SINYKF
|
| |