| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03542 |
|---|
| Symbol | |
|---|
| ID | 6308600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 5186251 |
|---|
| End bp | 5187672 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642642313 |
|---|
| Product | ISXo8 transposase |
|---|
| Protein accession | YP_001916138 |
|---|
| Protein GI | 188579209 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5659] FOG: Transposase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.973721 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGTCTG GGGGTTTTTC AGGGGCGACT AATTCCACTG TGTTACAAAT AATCGTATCT
TTGTGCCACT ATTGGAAGAC CTTCAGGCCG CGTGGGAGAG CTGTGTTGAA TAGGTCACTG
GAAGTGCGTT TTGAACAGTA CGGGGAAGTA GTTGCTGCCG CCCTGTCCCA TGCGGATCGC
AAACAGCCCG CACACTGGTA CCTGAAGGGG TTGCTACTGC CTGGAGGGCG CAAGAGCGTG
GAGCCCATGG CCGCGCGGGT GCACCCGCAG AACGTGCGCT CAGCCCATCA ATCGATGCAC
CATCTGGTGG CCGATGCCGA CTGGAGCGAT CAAGCGCTGC TGGCGGTGGC GGCGGCACAG
GTGCTGCCGC CCCTGAGCAG GAAGAGCGCA GCGTGTCACT GGATCGTGGA CGACACGGGA
TTTTCAAAGA AGGGGGTGCA TTCGGTCGGT GTTGCACGCC AGTACTGCGG CCGCCTTGGC
AAGACGGACA ATTGCCAGGT TGCCGTGAGT TTGTCGATCG CCAACGAACA CGGCAGCCTG
CCAGTGGGCT ATCGGCTGTA TCTTCCCGAG CAGTGGGCTC AGGACACTGT GCGGCGCAAG
AAGGCAGGCG TTCCGGATCA GGTCGTGTTT CAGACCAAGA CAGCGCTGGC CATGGATCAG
ATCGACAGCG CGCTGGCGAC AGGGATTGCG GCAGGCGTCG TGCTAGCCGA TGCGGCCTAC
GGCACCGAGA CCCACTGGCG AGACCAGCTC AGCGAACGCG GCCTGCTGTA CATGGTTGGC
GTCCGCAGCA ACACGAAGGT CTGGTGGGGA TCGCACCAAC CTGCGCCCAT GCCGCCAGCC
AGCCCTAAGG GCGGTCGGCC CCGCACACGA CCGATGCGCG ATAGCGCACA TGCGCCGATC
TCGGTACATG AAGTCGCGCA GCGCTTGCCC GCAAGGACGT ATCGGCAGGT CAGCTGGCGC
CAGGGCAGCG ACGCAACGCT CAGTTCGCGG TTCGCGGCGG TGCGGGTTCG TGCCGCACAC
AATCGCCAGG CACATGACGA GCAGTGGCTG CTGATCGAGT GGCCGCCGGG AGAGTCCGAG
CCCCGCCACT ACTGGTTCTC GACGCGACCA AAGCAAACGC CGGTCAAGAC ACTGGTTGCC
ACGGCACAAG GCCGATGGCG GATTGAACGC GATTATCAGG AGCTGAAGTC GGAGTTGGGC
CTGCATCACT ATGAAGGGCG TAACTGGCGT GGTTTTCACC ATCACGCCAG TCTGTGCATC
GCCGCATACG GGTTCTTGAT GCGCGAGCGC CTGCGCAGTA AAAAAAACTC CGTCGCATTC
AAGATGCCTG CAGTATCCAA AAGTGTCCGC CCGCGCGGGT CTGGCCCCAA TGCAACGTCA
CCATCCCAAC TCGATTGCCA CGCTGGCCTT CGGACTGGCT AG
|
|---|
| Protein sequence | MWSGGFSGAT NSTVLQIIVS LCHYWKTFRP RGRAVLNRSL EVRFEQYGEV VAAALSHADR
KQPAHWYLKG LLLPGGRKSV EPMAARVHPQ NVRSAHQSMH HLVADADWSD QALLAVAAAQ
VLPPLSRKSA ACHWIVDDTG FSKKGVHSVG VARQYCGRLG KTDNCQVAVS LSIANEHGSL
PVGYRLYLPE QWAQDTVRRK KAGVPDQVVF QTKTALAMDQ IDSALATGIA AGVVLADAAY
GTETHWRDQL SERGLLYMVG VRSNTKVWWG SHQPAPMPPA SPKGGRPRTR PMRDSAHAPI
SVHEVAQRLP ARTYRQVSWR QGSDATLSSR FAAVRVRAAH NRQAHDEQWL LIEWPPGESE
PRHYWFSTRP KQTPVKTLVA TAQGRWRIER DYQELKSELG LHHYEGRNWR GFHHHASLCI
AAYGFLMRER LRSKKNSVAF KMPAVSKSVR PRGSGPNATS PSQLDCHAGL RTG
|
|---|
| |