Gene PXO_03533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_03533 
Symbol 
ID6308610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp5199249 
End bp5199686 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content67% 
IMG OID642642323 
Productouter membrane efflux protein 
Protein accessionYP_001916148 
Protein GI188579219 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGGCA GTGATCTGGA GATTTGCAAC GCCAACCATG AGCTGCAGGT GCCCTCCAGT 
GGCGCGCATG CCCGCGTGCG CGCCACCGAA GCCGGTGCCG ACGCCGCGCT GGCGCAATTC 
GACCACACCG TGCTGCAGGC CTTGCGCGAA GTGCAGACCA CGTTGTCGCG CTATGCGCAG 
GACCTGGACC GCCTGCATCT GCTGGAGCAG GCGCAGCAGC AGGCCGAGCT GGCGTTGTCG 
CAGAACCGCC GCTTGTATCA AAGTGGACGC ACGCCGTACC TGTCCAGCCT GGATGCCGAG 
CGCACGCTGG CCACCGCCGA CATGACGCTG GCCAATGCAC AGGCGCAGGT ATCGCAGGAT 
CAGATTCAGC TGTTCCTGAC GCTGGACGGC GGTTGGGATG CCGCTGCCGG GCGCAGCGAC 
ACAACGACTG CGCGATGA
 
Protein sequence
MAGSDLEICN ANHELQVPSS GAHARVRATE AGADAALAQF DHTVLQALRE VQTTLSRYAQ 
DLDRLHLLEQ AQQQAELALS QNRRLYQSGR TPYLSSLDAE RTLATADMTL ANAQAQVSQD 
QIQLFLTLDG GWDAAAGRSD TTTAR