| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03488 |
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| Symbol | |
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| ID | 6308648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 5234736 |
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| End bp | 5237432 |
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| Gene Length | 2697 bp |
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| Protein Length | 898 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642642359 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001916184 |
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| Protein GI | 188579255 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCACAT CGCCGTTGCA TCGCCTGCTG CTGTGCGCAA GTTGCGTGGG AGTGCTGGCG
CTGGCCGGCT GTGGGAAGCA GGGCGCGAGC GATGCGGCCT CCGCCGCGAA ATCCTCTGCT
GCAACGACCG CAGGAACGCA GGCCGACAAG AGCGCCGACG CTGCGCAGGC ATTGATCGCG
CAACTGCGCG AACAGCTGGA CCGGCACCGC CGCATCATCG TGCTGCTGGC CGATGAGGAC
AAGCAGACCC CACGCGATCG CGCCATGTCC AGCAGCGTGG GGCAGCAGCT GTTCCATGAA
AATCTCGAGC AGCGCGAACG CATCGCTGCA TCGTTCGAAA CAGTCCTGAC ATCCAAGGAC
GCGAACCGGT TCGCGACGAT TGCTGCGGTG CTGGACGAGG TGGAATCGGC GCCGGATCTC
TCCGATGCCG ACCGCCTCGC CGTTGGCGAG GTATTGCGCG ATCTGCATGC GCGCATCGGT
CGCGACTCTG CGTTGCCAGC GGTGAAACTG CATCAGCGCA TCGGCGAGGA TCTGGAGGCG
CTGGACGAAA TCGAGCGCAG CTACACCAAG GAGCTGACGC AGATCTTCAG TCGCTTCGAC
CGCAGCCGCG CCATCGTGCC CAAGCGCGAG AAGTGGGACG ACTACGTGGC GCATCTGCGC
ACGCTGTACA CGCGCGAGAA GATCCTGCGT GACCATGGCG TGGTGGAGCC GTATCCGTTC
TCGGCACGCG ACAGCGACAG CGAAGTGTTC GGCCGCGACC TGCCACCCAA AACAGTGGTG
CTGACCTTCG ACGATGGTCC GCACAAGGCC TATACCGAAG AGATCGTGGC GATCCTCAAA
CGCTACGACG TGCCCGGGGT GTTCTTCGAA GTAGGGCGCA ATCTGGGTAG CCCGGATGCC
GCCGGCAAAC CCAAACTCGC GCCGCTGTCC AAGATCAGCC GCACGCTGAT GGAAGAGGGG
TATGCAGTTG GAAACCACAG CCTGACCCAC GCGCAGTTGT CCAAAACCAC CGGCGCAGCG
CAGCGCAGCC AGGTACTGGA TACCGACACC TTGCTGCGTG CGGTGGACGA CAAGCGCGCG
CCGTTGTTCC CGTTTCCGTA TGGCGCGCGC ACTGCGGAAG GCTTGCAGCT GCTGGGCGAG
GCCGGCCTGA AGTCCATCAT GTGGAATATC GACTCGCTGG ACTGGGCCGA CCCGGTGCCG
GAATCCATCG TGCAACGCGT GCTCGACCAA GTGAACAAGG CGCAGCGCGG CATTGTGCTG
TTCCATGATA TTCACGACCG CGCGGTGAAA GCGCTGCCGC AAATTCTTGA TCGCCTCATC
GCCGATGGTT ACCAGTTCGC CGACTGGAAT GGTCGCGACT TTTCGGTGGC GCGCGCACCC
AGCGCGGTGG CCGATGCCAC GGTGACCACC GGCTATGCCC AATCATGGGC GATCGTGATC
GGTATCGACG ATTACGCACA TTGGCCCAAG CTGGAATACG CGGCCAACGA TGCGCAGGCG
ATTGCCAGCA CCTTGACCGG ACCGCTGGGA TTTCCGTCGT CGCAGGTGAT CGTGCTCAAG
AACGGTGAGG CGACACGCAA CAACATCCTC GCCGCATTTC ACGACCGTCT CGGCGAAGGC
CGCATGCAGA CCAACGATCG CGTGTTCGTG TTCTTCGCCG GGCACGGCGC CACGCGCCGG
CTCGCCTCCG GGCGCGATCT TGGTTACATC GTTCCGGTCG ACTCGGACCC GGAGCATCTG
GCCAACGATG CGATCGCAAT GAGCGATTTG CAGAACATCG CCGAAAGCCT GCAGGCCAAG
CACGTCTTGT TCGTGATGGA TGCATGCTAC AGCGGGCTGG GATTGACGCG TGGTGGGCCA
ACGTCCAGCG CGTATCTGCG CGAGAACGCG CGGCGGATTG CACGCCAGAT GCTGACCGCC
GGCGGTGCCG ATCAACAGGT GGCCGATAGC GGGCCCAATG GGCATTCGGT GTTCACCTGG
GTGTTGTTGC AGGCATTGGC CGGCAAGGGG GATCTCAATG GCGATGGCTT GATCACCGGA
ACCGAACTGG CTGCATATGT GGCGCCTGCG GTGCCGGTCG TCTCGGCGCA GACACCGGCA
TTCGGCAGCC TGCCGGGTTC GCAAGGCGGT GAATTCGTGT TCCAGGTTCC CAGCGGCGAA
GAGTTTCTCA CTGCAGAGAC CGCACAGCTG TCTGCCGATG CGATTGCGCT TAACGGACGC
GTGGATGCCG CGCGCCCTGC GCCGGCCACA GCCGGTGCGC CAGCGACGGC AGCGCCGGTC
ACGGTGAAAA CCCTGCAAGG TGGCGAAGCC ACGCTGGTGG TGCCCACCGC AGTGAAGAGC
ACCGACCGCC AACGCGCGCA ATTGGCCAAC GAACGCGGCC TGCAGTTGTA CAAGGAAAAG
CGCTATGCCG ACGCAGCCGA GCAATTTGCC GAAGCGCTCA AGCTGCGTGC GGATTTTGCA
CTGGCGGCCA ATAACCTTGG CTTTGTGTAT TTCCGCCAGG GGCGCTTCGC CGAATCGGCG
CGCTGGCTGG AAACTACCTT GAAGATCGAT CCGTCGCGTG CGGTGGCCTA TCTCAATCTG
GGCGATGCGT ATGCAGAGGG CGGTGATCGC GAGAAGGCAC GCAAGGCCTA TTCGACGTAT
CTGGAGTTAC AGGCGCAAGT CAGCGGTGCG GCGCAGGCGC AGCTGCAATC GCTGTGA
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| Protein sequence | MTTSPLHRLL LCASCVGVLA LAGCGKQGAS DAASAAKSSA ATTAGTQADK SADAAQALIA
QLREQLDRHR RIIVLLADED KQTPRDRAMS SSVGQQLFHE NLEQRERIAA SFETVLTSKD
ANRFATIAAV LDEVESAPDL SDADRLAVGE VLRDLHARIG RDSALPAVKL HQRIGEDLEA
LDEIERSYTK ELTQIFSRFD RSRAIVPKRE KWDDYVAHLR TLYTREKILR DHGVVEPYPF
SARDSDSEVF GRDLPPKTVV LTFDDGPHKA YTEEIVAILK RYDVPGVFFE VGRNLGSPDA
AGKPKLAPLS KISRTLMEEG YAVGNHSLTH AQLSKTTGAA QRSQVLDTDT LLRAVDDKRA
PLFPFPYGAR TAEGLQLLGE AGLKSIMWNI DSLDWADPVP ESIVQRVLDQ VNKAQRGIVL
FHDIHDRAVK ALPQILDRLI ADGYQFADWN GRDFSVARAP SAVADATVTT GYAQSWAIVI
GIDDYAHWPK LEYAANDAQA IASTLTGPLG FPSSQVIVLK NGEATRNNIL AAFHDRLGEG
RMQTNDRVFV FFAGHGATRR LASGRDLGYI VPVDSDPEHL ANDAIAMSDL QNIAESLQAK
HVLFVMDACY SGLGLTRGGP TSSAYLRENA RRIARQMLTA GGADQQVADS GPNGHSVFTW
VLLQALAGKG DLNGDGLITG TELAAYVAPA VPVVSAQTPA FGSLPGSQGG EFVFQVPSGE
EFLTAETAQL SADAIALNGR VDAARPAPAT AGAPATAAPV TVKTLQGGEA TLVVPTAVKS
TDRQRAQLAN ERGLQLYKEK RYADAAEQFA EALKLRADFA LAANNLGFVY FRQGRFAESA
RWLETTLKID PSRAVAYLNL GDAYAEGGDR EKARKAYSTY LELQAQVSGA AQAQLQSL
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