| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03487 |
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| Symbol | |
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| ID | 6308649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 5237511 |
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| End bp | 5239235 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642642360 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_001916185 |
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| Protein GI | 188579256 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAGA CCCGTGTTTT CCTGATTTTT GCCTGGCTGA TGGTCGCGGC GCTGCTGTGG
ATGGAGTGGG GCAAAGAAAA AGCGGCTGCC AATGCGCCCG GGGCGGCTGC GACGCAATCG
GTGCCGGCGG CACGTGATCT GGATGCGGCA ACGCCAAGCG CGGCGAATGT GCCCGCAGCT
CAGGCGATTC CGCAGGCTGG TGCGCCGGGT AAGGTTCCGG CAACCAGCAC CACCACCGCG
ACACCGGCTG CTGCCGGCAC TGCACCGGTG GTCACCCTGA CCTCGGACGT GCTGCGCCTG
AAGCTGGATG GCCGCAGCGT GCTCGACGCC GAGCTGCTGC AGTTCCCGCA GACCAAGGAC
GGCACCGCGC CGGTCAGCCT GCTGACGGAA GACGCGGCGC ACCCGTACAA CGCCACCAGT
GGCTGGGCCA GTGAGCATTC GCCGGTGCCG GGCGTCGGCG GCTTTCGCGC AGAACAGCCT
GGCACGACGT TTGAACTCGC CAAGGGCCAG AACACGCTGG TGGTGCCGTT CGTGTGGAAT
GGCCCCAACG GCGTGTCGAT CCGTCGCACC TTTACCCTGG AACGTGGTCG CTATGCGATC
TCGATCAAGG ATGAAGTGAT CAACAAGAGC GCCGCGCCGT GGAACGGTTA TGTGTTCCGC
AAGCTGAGTC GGGTGCCGAC CATCCTCAGC CGCGGCATGA CCAATCCGGA TTCCTTCAGC
TTCAACGGGG CGACCTGGTA CAGCCCGCAG GCAGGCTACG AGCGTCGTGC GTTCAAGGAC
TACATGGACG ACGGCGGCCT CAATCGCCAG ATCACCGGCG GCTGGATAGC GCTGTTGCAG
CACCACTTCT TCACCGCGTG GATTCCGCAG AACGACCAAG CCTCGCTGTA TGTGTTGAAC
AAGGACGGCC CACGCGACGT GGCCGAGTTG CGCGGCCCGG CTTTCACCGT GGCGCCGGGC
CAGACCGCGA CCACCGAAGC GCGCCTGTGG GTGGGTCCGA AGCTGGTCAG TCTGATCGCC
AAGGAAGACG TGAAGGGGCT GGACCGCGTG ATCGATTACA GCCGCTTCTC GATCATGGCC
ATCATCGGCC AGGGCCTGTT CTGGGTGCTG AGCCATCTGC ACAGCTTCCT GCACAACTGG
GGCTGGGCGA TCGTCGGCCT GGTGGTGTTG CTGCGGTTGG TGCTGTATCC GCTGTCGTCT
GCGCAGTACA AGTCCAGTGC CAAGATGCGC AAGTTCCAGC CGCGCCTGGC GCAACTCAAG
GAGCGCTACG GCGACGATCG CGTCAAGTAC CAGCAGGCCA CGATGGAGCT GTTCAAGAAG
GAAAAGATCA ACCCGATGGG CGGCTGCCTG CCGCTGCTGA TCCAGATGCC GATCTTCTTC
GCGCTGTACT GGGTGCTGGT GGAGTCGGTG GAACTGCGTC AGGCGCCGTG GCTGGGCTGG
ATCCAGGACC TGACCGCGCG CGACCCGCAC TTCATCCTCC CGGCGCTCAA CATCGCGATC
ATGTGGGCGA CGCAGAAGTT GACCCCGACC CCGGGCATCG ATCCGATGCA GGCCAAGATG
ATGCAGTTCA TGCCGCTGGT GTTCGGCGCC ATGATGGCCT TCGTGCCGTC CGGTCTGGTG
CTGTACTGGG TGGTCAACGG CGGTTTGAAT CTGCTTATCC AGTGGTGGAT GATCCGCCAG
CACGGCGAGA AGCCGAGCAA GATCATCCGG GCCAACGCCA AGTAA
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| Protein sequence | MNQTRVFLIF AWLMVAALLW MEWGKEKAAA NAPGAAATQS VPAARDLDAA TPSAANVPAA
QAIPQAGAPG KVPATSTTTA TPAAAGTAPV VTLTSDVLRL KLDGRSVLDA ELLQFPQTKD
GTAPVSLLTE DAAHPYNATS GWASEHSPVP GVGGFRAEQP GTTFELAKGQ NTLVVPFVWN
GPNGVSIRRT FTLERGRYAI SIKDEVINKS AAPWNGYVFR KLSRVPTILS RGMTNPDSFS
FNGATWYSPQ AGYERRAFKD YMDDGGLNRQ ITGGWIALLQ HHFFTAWIPQ NDQASLYVLN
KDGPRDVAEL RGPAFTVAPG QTATTEARLW VGPKLVSLIA KEDVKGLDRV IDYSRFSIMA
IIGQGLFWVL SHLHSFLHNW GWAIVGLVVL LRLVLYPLSS AQYKSSAKMR KFQPRLAQLK
ERYGDDRVKY QQATMELFKK EKINPMGGCL PLLIQMPIFF ALYWVLVESV ELRQAPWLGW
IQDLTARDPH FILPALNIAI MWATQKLTPT PGIDPMQAKM MQFMPLVFGA MMAFVPSGLV
LYWVVNGGLN LLIQWWMIRQ HGEKPSKIIR ANAK
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