Gene PXO_03481 details

Gene Information

• Locus tag: PXO_03481
• Symbol: recF
• ID: 6303522
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 4013
• End bp: 5110
• Gene Length: 1098 bp
• Protein Length: 365 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642637317
• Product: recombination protein F
• Protein accession: YP_001911202
• Protein GI: 188574273
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1195] Recombinational DNA repair ATPase (RecF pathway)
• TIGRFAM ID: [TIGR00611] recF protein

Plasmid Coverage information

• Num covering plasmid clones: 49
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGGTTGT CCATTCATCG GCTTCGTCGG TTCCAGACCG TCGAGCTACA TCCGGCCAGT 
GCATTGAATC TGCTCACCGG CGACAACGGT GCAGGCAAGA CCAGCGTGCT CGAGGCGCTG 
CACCTGATGG CATATGGCCG CAGCTTCCGT GGCCGCGTCC GTGACGGCCT GATCCAACAA 
GGCGCGAACG ACCTTGAAGT CTTCGTGGAA TGGAAAGAAG GCGGCAGTGC TGCAGGCGAG 
CGGACACGTC GCGCCGGCCT ACGTCATAGC GGCCAGGAAT GGACGGGGCG TCTGGATGGC 
GAAGACGTTG CACAGTTGGG GTCTTTGTGT GCTGCGTTGG CCGTGGTGAC CTTTGAGCCC 
GGCAGCCACG TGTTGATCAG CGGCGGTGGT GAACCCCGCC GTCGCTTCCT GGACTGGGGG 
CTGTTCCACG TGGAACCCGA CTTCCTCGCC TTGTGGCGTC GCTACGTGCG CGCGCTCAAA 
CAGCGCAATG CGTTGCTCAA ACAAGGCGCG CAGCCGCGCA TGCTGGATGC CTGGGATCAT 
GAACTCGCCG AATCCGGGGA AACGCTGACA TCCCGGCGCA TGCGCTACCT GGAACGCCTG 
CAGGACCGGC TGATTCCGGT GGCAGACGTG ATCGCACCGT CGCTTGGGCT GTCCGCGTTG 
ACGTTCGCCC CAGGCTGGAA ACGCCACGAG GTCTCGCTTG CCGATGCCCT TTTGTTAGCC 
CGCGATCGCG ACCGCCAGAA CGGTTACACC TCGCAAGGCC CACACCGCGC GGATTGGATG 
CCTCACTTCG ACGTGCTCCC TGGCAAAGAT GCACTTTCTC GCGGGCAAGC CAAGCTCACT 
GCCCTCGCCT GCCTCCTTGC ACAAGCAGAA GACTTTGCGT TCGAGCGAAG CGAATGGCCG 
GTGATCGCGC TGGACGACCT GGGTTCGGAG CTGGACCGGC ACCACCAGGC GCGCGTCCTG 
CACCGGCTGG TCTCGGCGCC AGCGCAGATG CTGATCACCG CGACCGAGAT CCCGCCCGGG 
CTCGCGGACG CCGGTGCGCT ATTGCACCGG TTCCACGTGG AACACGGTCA GGTCGCACTG 
CAAGCCCCCT CGGACTGA 

 

Protein sequence

MRLSIHRLRR FQTVELHPAS ALNLLTGDNG AGKTSVLEAL HLMAYGRSFR GRVRDGLIQQ 
GANDLEVFVE WKEGGSAAGE RTRRAGLRHS GQEWTGRLDG EDVAQLGSLC AALAVVTFEP 
GSHVLISGGG EPRRRFLDWG LFHVEPDFLA LWRRYVRALK QRNALLKQGA QPRMLDAWDH 
ELAESGETLT SRRMRYLERL QDRLIPVADV IAPSLGLSAL TFAPGWKRHE VSLADALLLA 
RDRDRQNGYT SQGPHRADWM PHFDVLPGKD ALSRGQAKLT ALACLLAQAE DFAFERSEWP 
VIALDDLGSE LDRHHQARVL HRLVSAPAQM LITATEIPPG LADAGALLHR FHVEHGQVAL 
QAPSD