Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03480 |
Symbol | gyrB |
ID | 6303523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 5226 |
End bp | 7670 |
Gene Length | 2445 bp |
Protein Length | 814 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642637318 |
Product | DNA gyrase subunit B |
Protein accession | YP_001911203 |
Protein GI | 188574274 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACG AACAAAACAC CCCGCCAACA CCCAACGGCA CTTACGACTC CAGCAAGATC ACCGTGCTGC GTGGCCTGGA AGCCGTCCGC AAGCGCCCCG GCATGTACAT CGGCGATGTC CATGACGGCA CCGGCCTGCA TCACATGGTG TTCGAGGTGG TCGACAACTC GGTCGACGAA GCCCTGGCCG GGCATGCCGA CGACATCGTA GCGAAAATCC TGGTCGATGG CTCGGTGGCG GTGTCAGACA ACGGACGCGG CGTGCCGGTC GACATTCACA AGGAAGAAGG CGTGTCCGCG GCCGAGGTGA TCCTCACCGT GCTGCATGCC GGCGGCAAGT TCGACGACAA CAGCTACAAG GTCTCCGGCG GCCTGCATGG CGTGGGCGTT TCGGTGGTCA ACGCGCTGTC CGAGCACCTG TGGCTGGACA TCTGGCGCGA TGGTTTCCAC TACCAGCAGG AATATGCGCT GGGCGAGCCG CAGTACCCGC TCAAGCAGCT GGAAGCATCG ACCAAGCGCG GCACCACGCT GCGCTTCAAG CCGTCCGCGG CCATCTTCAG TGACGTCGAG TTCCACTACG ACATCCTGGC GCGGCGCCTG CGTGAGCTGT CGTTCCTCAA TTCCGGCGTC AAGATCACCC TGATCGACGA GCGTGGCGAA GGCCGTCGCG ACGATTTCCA TTACGAAGGC GGCATCCGCA GCTTCGTGGA GCATCTTGCC CAGCTGAAGT CGCCGCTGCA CCCGAACGTG ATCTCGGTGA CCGGCGAGCA CAATGGCATT GTGGTGGACG TGGCCCTGCA GTGGACCGAC GCCTACCAGG AAACCATGTA CTGCTTCACC AACAACATCC CGCAGAAGGA TGGCGGCACC CACTTGGCCG GCTTCCGCGC CGCGCTGACG CGCGTGCTGG GCACCTACAT CGAGCAGAAC GGCATCGCCA AGCAGGCCAA GGTTGCGCTG ACCGGTGACG ACATGCGCGA AGGCATGATC GCAGTGCTGT CGGTCAAAGT GCCCGACCCC AGCTTCTCCT CGCAGACCAA GGAAAAGCTG GTCAGCTCGG ACGTGCGCCC GGCGGTGGAA AACGCCTTCG GTGCGCGCTT GCAGGAGTTC CTGCAAGAGA ACCCGAACGA AGCCAAGGCC ATCACTGGCA AGATCGTCGA TGCCGCGCGT GCGCGCGAAG CCGCGCGCAA GGCGCGCGAC CTCACCCGCC GCAAGGGCGC GCTGGATATC GCCGGCCTGC CGGGCAAGCT GGCCGACTGC CAAGAAAAAG ATCCGGCGCT GTCCGAACTG TTCATTGTCG AGGGTGACTC GGCAGGTGGC TCGGCCAAGC AGGGACGCAA CCGCAAGAAC CAGGCGGTGC TGCCGTTGCG CGGCAAGATC CTCAACGTGG AACGTGCGCG CTTCGACCGC ATGCTGGCGT CGGACCAGGT CGGCACGCTG ATCACCGCAC TGGGCACCGG CATCGGCCGC GACGAGTACA ACCCGGACAA ACTGCGCTAC CACCGCATCA TCCTGATGAC CGACGCCGAC GTCGACGGCT CGCACATCCG TACCCTGTTG CTGACCTTCT TCTACCGGCA GATGCCGGAG CTGATCGAGC GCGGCTACAT CTACATCGGC CTGCCGCCGC TGTACAAGCT CAAGCAGGGC AAGAGCGAGC TGTATCTGAA GGACGATGCC GCGCTCAACG CCTACCTGGC CAGCAATGCG GTCGAAGGTG CGGCGCTGAT TCCGGCCACC GACGAGCCGC CGATCACCGG CGAAGCGCTG GAAAAACTAC TGCTGCTGTT CACCAGCGCC AACGAAGCGA TTGCGCGCAC CGCGCACCGC TACGACCCGG CTTTGCTGAC CGCATTGATC GACCTGCCGC CGCTGGATGT GGAAACACTG CAGGCCGAAG GCAACCAGCA TCCGGCCCTG GATGCGCTGC AGGCAGTGCT CAATCGCGGC ACCCTGGGCA CCGCGCGCTA CCAGTTGCGC TTCGACCCGG CCACCGAGAA CGCGCCTGCC ACGCTGGTGG CGATCCGCCG TCATATGGGC GAAGAATTCA CCCAGGTGCT GCCGATGGGG GCGTTCGAAA GCGGCGAGCT GCGTCCGCTG CGTGAGGTAT CGCTGGCCCT GCATGATCTG GTGCGTGAGG GCGCGCAGAT CGTGCGCGGC AACAAGAGCC ACCCGATCAC CAGCTTCGCG CAGGCGCACG CCTGGCTGCT GGACGAGGCC AAGAAGGGCC GCCAGGTCCA GCGCTTCAAG GGCCTGGGCG AAATGAACGC CGAGCAGCTG TGGGAAACCA CCGTCAACCC CGACACCCGT CGCCTGTTGC AGGTGCGGAT CGAGGATGCG GTGGCCGCCG ACCAGATCTT CAGCACCCTG ATGGGCGATG TGGTCGAACC ACGCCGCGAT TTCATCGAGG ACAACGCGCT GAAGGTGTCC AACCTGGATA TCTGA
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Protein sequence | MTDEQNTPPT PNGTYDSSKI TVLRGLEAVR KRPGMYIGDV HDGTGLHHMV FEVVDNSVDE ALAGHADDIV AKILVDGSVA VSDNGRGVPV DIHKEEGVSA AEVILTVLHA GGKFDDNSYK VSGGLHGVGV SVVNALSEHL WLDIWRDGFH YQQEYALGEP QYPLKQLEAS TKRGTTLRFK PSAAIFSDVE FHYDILARRL RELSFLNSGV KITLIDERGE GRRDDFHYEG GIRSFVEHLA QLKSPLHPNV ISVTGEHNGI VVDVALQWTD AYQETMYCFT NNIPQKDGGT HLAGFRAALT RVLGTYIEQN GIAKQAKVAL TGDDMREGMI AVLSVKVPDP SFSSQTKEKL VSSDVRPAVE NAFGARLQEF LQENPNEAKA ITGKIVDAAR AREAARKARD LTRRKGALDI AGLPGKLADC QEKDPALSEL FIVEGDSAGG SAKQGRNRKN QAVLPLRGKI LNVERARFDR MLASDQVGTL ITALGTGIGR DEYNPDKLRY HRIILMTDAD VDGSHIRTLL LTFFYRQMPE LIERGYIYIG LPPLYKLKQG KSELYLKDDA ALNAYLASNA VEGAALIPAT DEPPITGEAL EKLLLLFTSA NEAIARTAHR YDPALLTALI DLPPLDVETL QAEGNQHPAL DALQAVLNRG TLGTARYQLR FDPATENAPA TLVAIRRHMG EEFTQVLPMG AFESGELRPL REVSLALHDL VREGAQIVRG NKSHPITSFA QAHAWLLDEA KKGRQVQRFK GLGEMNAEQL WETTVNPDTR RLLQVRIEDA VAADQIFSTL MGDVVEPRRD FIEDNALKVS NLDI
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