| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03474 |
|---|
| Symbol | |
|---|
| ID | 6303529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 12788 |
|---|
| End bp | 13177 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642637324 |
|---|
| Product | biopolymer transport ExbD1 protein |
|---|
| Protein accession | YP_001911209 |
|---|
| Protein GI | 188574280 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACA TCAATGTGAC GCCCCTCGTG GACGTCATGC TGGTGCTGCT GATCATCTTC
ATCATTACGG CGCCGCTGAT GTCCCATAAG GTCAAGGTGG AGCTGCCACA GGCCAACTTG
ATCCAGAAGG AAGATGCGGA GAAACGCGCC GCGCCGATCA CTCTGGCCGT CAAGGAAGAT
GGGTCGCTGT ACTGGAACGA CGAGCCGATT TCCAAGGAAG CCTTGGAGTC GCGCCTGTCC
ACCGCAGCAC AGCAGACCCC GCAGCCGCCG CTCAATTTGC GTGGCGACCG CACGACCAAG
ATGCGTACGA TCAACGAGAT CACCAAGATC GCGCAGGGTC AGGGCATGCT GGACGTCGGT
TTCGTTGCAA CCAAAGTGAA GGGGCAGTAA
|
|---|
| Protein sequence | MADINVTPLV DVMLVLLIIF IITAPLMSHK VKVELPQANL IQKEDAEKRA APITLAVKED
GSLYWNDEPI SKEALESRLS TAAQQTPQPP LNLRGDRTTK MRTINEITKI AQGQGMLDVG
FVATKVKGQ
|
|---|
| |