Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03428 |
Symbol | |
ID | 6303572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 47997 |
End bp | 48959 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642637366 |
Product | ISXoo6 transposase |
Protein accession | YP_001911251 |
Protein GI | 188574322 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGACGA CGATGCAACT GACCTTCGGC GACGCGGAGT ACAACGGCAA GCGCAAGCGG ACGCGGCGTG AGGTGTTCTT GGCCGAGATG GACCAGGTCG TGCCGTGGAA GGGCCTGCTG GCGCTGATCG AGCCGCACTA TCCAAAGTCG GGGCAGCCGG GGCGACAGCC GTATCGGCTG GAAACGATGC TGCGCATCCA CTTTTTGCAG CAGTGGTATG CGCTGAGCGA TCCCTCGGCG GAAGAAGCGC TGTACGACAC GGTGTCGATG CGCCGCTTCG CGAAGATCGG CGGGCTGGAC GAGGTGCCGG ATGAAACGAC GATTCTCCAC TTCCGGCATC TGCTGGAGCG GCATGATCTG GCGCGCAAGC TGTTCAGGGT CAACGCGCAC CTGTCGCGTA AAGGGCAGAG TCTGCGGGGC GGGACGATCG TGGATGCCAC GATCATTGCG GCGCCCAGTT CGACCAAGAA CAAGCAGGGC GAGCGCGATC CGGACATGCA CCAGACCAAG AAGGGGAATC AATATGACTT CGGGATGAAG GCGCACATCG GGGTGGACGA TGACTCCGGG CTGGTGCACC ACGTCGAATG CACGGCGGCC AACGTGGCCG ATATCACGCA AGCGCACAAG CTGCTGCACG GCAAGGAGGA TACGGTGTGC GGGGACAGCG GCTACACCGG GCTTGAGAAG CGCGAGGAGA TGAAGCGCAA GCGCACGCTG CGCTACCTGA TCGCCGAGAA ACCCTCGAAG CTGAAGCAGA TCAAGAACAA ACGCGAACTG AAGTTGGCCA AGCGCTGGGA GCACACCAAG GCCAGCCTGC GGGCGAAGGT GGAACACCCG TTCCGGGTGA TCAAGCGTCA GTTTGGCTAC GTCAAGGTGC GCTATCGCGG CCTGGTCAAG AACACCGCGC AGATGCTGAC GCTGTTTGCG CTGTCGAATC TGTGGCTGAA GCGCAAAGAG TAA
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Protein sequence | MTTTMQLTFG DAEYNGKRKR TRREVFLAEM DQVVPWKGLL ALIEPHYPKS GQPGRQPYRL ETMLRIHFLQ QWYALSDPSA EEALYDTVSM RRFAKIGGLD EVPDETTILH FRHLLERHDL ARKLFRVNAH LSRKGQSLRG GTIVDATIIA APSSTKNKQG ERDPDMHQTK KGNQYDFGMK AHIGVDDDSG LVHHVECTAA NVADITQAHK LLHGKEDTVC GDSGYTGLEK REEMKRKRTL RYLIAEKPSK LKQIKNKREL KLAKRWEHTK ASLRAKVEHP FRVIKRQFGY VKVRYRGLVK NTAQMLTLFA LSNLWLKRKE
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