Gene PXO_03428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_03428 
Symbol 
ID6303572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp47997 
End bp48959 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content62% 
IMG OID642637366 
ProductISXoo6 transposase 
Protein accessionYP_001911251 
Protein GI188574322 
COG category[L] Replication, recombination and repair 
COG ID[COG3039] Transposase and inactivated derivatives, IS5 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGACGA CGATGCAACT GACCTTCGGC GACGCGGAGT ACAACGGCAA GCGCAAGCGG 
ACGCGGCGTG AGGTGTTCTT GGCCGAGATG GACCAGGTCG TGCCGTGGAA GGGCCTGCTG
GCGCTGATCG AGCCGCACTA TCCAAAGTCG GGGCAGCCGG GGCGACAGCC GTATCGGCTG
GAAACGATGC TGCGCATCCA CTTTTTGCAG CAGTGGTATG CGCTGAGCGA TCCCTCGGCG
GAAGAAGCGC TGTACGACAC GGTGTCGATG CGCCGCTTCG CGAAGATCGG CGGGCTGGAC
GAGGTGCCGG ATGAAACGAC GATTCTCCAC TTCCGGCATC TGCTGGAGCG GCATGATCTG
GCGCGCAAGC TGTTCAGGGT CAACGCGCAC CTGTCGCGTA AAGGGCAGAG TCTGCGGGGC
GGGACGATCG TGGATGCCAC GATCATTGCG GCGCCCAGTT CGACCAAGAA CAAGCAGGGC
GAGCGCGATC CGGACATGCA CCAGACCAAG AAGGGGAATC AATATGACTT CGGGATGAAG
GCGCACATCG GGGTGGACGA TGACTCCGGG CTGGTGCACC ACGTCGAATG CACGGCGGCC
AACGTGGCCG ATATCACGCA AGCGCACAAG CTGCTGCACG GCAAGGAGGA TACGGTGTGC
GGGGACAGCG GCTACACCGG GCTTGAGAAG CGCGAGGAGA TGAAGCGCAA GCGCACGCTG
CGCTACCTGA TCGCCGAGAA ACCCTCGAAG CTGAAGCAGA TCAAGAACAA ACGCGAACTG
AAGTTGGCCA AGCGCTGGGA GCACACCAAG GCCAGCCTGC GGGCGAAGGT GGAACACCCG
TTCCGGGTGA TCAAGCGTCA GTTTGGCTAC GTCAAGGTGC GCTATCGCGG CCTGGTCAAG
AACACCGCGC AGATGCTGAC GCTGTTTGCG CTGTCGAATC TGTGGCTGAA GCGCAAAGAG
TAA
 
Protein sequence
MTTTMQLTFG DAEYNGKRKR TRREVFLAEM DQVVPWKGLL ALIEPHYPKS GQPGRQPYRL 
ETMLRIHFLQ QWYALSDPSA EEALYDTVSM RRFAKIGGLD EVPDETTILH FRHLLERHDL
ARKLFRVNAH LSRKGQSLRG GTIVDATIIA APSSTKNKQG ERDPDMHQTK KGNQYDFGMK
AHIGVDDDSG LVHHVECTAA NVADITQAHK LLHGKEDTVC GDSGYTGLEK REEMKRKRTL
RYLIAEKPSK LKQIKNKREL KLAKRWEHTK ASLRAKVEHP FRVIKRQFGY VKVRYRGLVK
NTAQMLTLFA LSNLWLKRKE