Gene PXO_03398 details

Gene Information

• Locus tag: PXO_03398
• ID: 6303603
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 76362
• End bp: 76934
• Gene Length: 573 bp
• Protein Length: 190 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 642637397
• Product: type III secretion protein HrpB4
• Protein accession: YP_001911282
• Protein GI: 188574353
• TIGRFAM ID: [TIGR02560] type III secretion protein HrpB4

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCGCAAC TGGCAGAATC GTTGGACGCC GCACGGGTGG CGCATTGGCT TGGCCCGGTG 
GCAGCGTCAG GCTGGGCAGC GGCGCCCGTC TACCGTCGTA TGCGGGTAAT CCAGGCGTGG 
TCAGGATGGT CGGAATTATC GCCGTCTGCG CTCGGCGTGC ACGCGAACCA ACTTGCCCTG 
CTGATGCCCG CGCGATTGGC CAATGTCCTG ATCGCGCGTG CGCTGTTCTC GCGCGGGTTG 
GCAGTGCGCC GGTGCATCGA GCGCGAACGT CTGGGCTGGC TCGAACAGTG TGTGGGGCCG 
GCCGTGCTTG AGCATGTGCG CCAGAACGCG TCGGCCGGCC TCTCCGTGCC CCTGTTGCCA 
CGCGATGCCG ATCAGGCGGC GTGGGTCGGC GACGGTTGGC GTCGGATGCA GGCCGATGGC 
GTCTGGTCCA ACCCGGTTGT TGCCAAGCTG CTGGCGCTGT CCTTGCCGTT GGGCGCCGCG 
CAGGTGGCGA CCGTTGCAGC AGACGGTGCA AGCGCTGCAT TCCTGACCGC GCTTCCCACC 
CTGATGCCGG AGGCGTCATG CGTGTCTGGT TGA 

 

Protein sequence

MAQLAESLDA ARVAHWLGPV AASGWAAAPV YRRMRVIQAW SGWSELSPSA LGVHANQLAL 
LMPARLANVL IARALFSRGL AVRRCIERER LGWLEQCVGP AVLEHVRQNA SAGLSVPLLP 
RDADQAAWVG DGWRRMQADG VWSNPVVAKL LALSLPLGAA QVATVAADGA SAAFLTALPT 
LMPEASCVSG