| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03397 |
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| Symbol | |
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| ID | 6303604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 76919 |
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| End bp | 77620 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642637398 |
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| Product | type III secretion system protein HrpB |
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| Protein accession | YP_001911283 |
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| Protein GI | 188574354 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02499] type III secretion apparatus protein, HrpE/YscL family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGTCT GGTTGAGGTC AACGCCCGAC GCGATCGGTC TGGATTGCGA TGTCGTTCCG
CGCGAGGCGC TGGCCTCGGT GTTGGCGCTG GATGCTGCCG CTGTCGAAGT GCACGCACGC
TGCGAGCAGG CCCTGAGCCA GGCGCAGGCA CGTGCACAGA CGCTGATCGA AGAGGCCCAG
CAGCAGGCCG AGGCGATCCT GCACGATGCG CGCCAAAAGG CCGAGCGCAG CGCACGCCTA
GGATATGCAG CCGGCCTGCG ACGTCAGCTT GATGAGTGGA ACGAATCCGG CCTGCGTCAT
GCCTTTGCCG CCGAAACGGC AGCGCACCGG GCACGTGAGC GCCTGGCTGA GATTGTGGCG
CGCACCTGCG AGCACGTCAT CCTCGGACAC GATCCCGCGG CGCTGTATGC GCGTGCGGCG
CAGGCCTTGG AAGGTGCCCT GGACGAGGCC AAAGCCTTGC GCGTGAGCGT GCACCCCGAG
GCGCTGGACG CTGCGCGGCG CGCCTTCGAC GCGGCCGCCA CCAAGGCGGG CTGGACCCTG
CAGGTAGAGC TGTGCGGCGA TGCCGATCTG GCCGTGGGCG CCTGCGTGTG CGAATGGGAT
ACGGGCGTGT TCGAGACCGA TCTGCGCGAT CAGCTGCGCA GTCTGCGGCG CGTCATCCGC
CGCGTGTTGG CCGCACCCCA GGAGCCCGCG GATGTTGGCT GA
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| Protein sequence | MRVWLRSTPD AIGLDCDVVP REALASVLAL DAAAVEVHAR CEQALSQAQA RAQTLIEEAQ
QQAEAILHDA RQKAERSARL GYAAGLRRQL DEWNESGLRH AFAAETAAHR ARERLAEIVA
RTCEHVILGH DPAALYARAA QALEGALDEA KALRVSVHPE ALDAARRAFD AAATKAGWTL
QVELCGDADL AVGACVCEWD TGVFETDLRD QLRSLRRVIR RVLAAPQEPA DVG
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