| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03372 |
|---|
| Symbol | treY |
|---|
| ID | 6303634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 106768 |
|---|
| End bp | 109377 |
|---|
| Gene Length | 2610 bp |
|---|
| Protein Length | 869 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642637428 |
|---|
| Product | malto-oligosyltrehalose synthase |
|---|
| Protein accession | YP_001911313 |
|---|
| Protein GI | 188574384 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3280] Maltooligosyl trehalose synthase |
|---|
| TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATC TACGCGCCAC CGCCCGCCTG CAGCTGCATG CCGGTTTCAC CCTGCACGAT
GCCCTCGCGC AGCTGCCGTA TTACGCCGGG CTGGGCATCA GTCACCTGTA TCTGTCGCCG
ATCGGTACGG CGGTGCCGGG CTCCACGCAC GGCTACGACA ACATCGACCC GACCGTGGTC
AATCCCGAAC TCGGCGGCGA AGATGCGTTG ATCGCGCTCT CGCAAGCCGC GCGCGAACAC
GGCATGGGCT TGATCGCCGA TATCGTGCCC AACCACATGG CCACGCATGC GCAGAACGCG
TGGTGGTGGG ACGTGCTGCG CAATGGCCGC AGCGCCAAGC ATGCCGACTG GTTCGACATC
GATTGGCGCG CACCGGGGCG CGACGGCAAG GTGTGGCTGG CGGTGCTGGA CCGGCCGTAT
GCGACAGCGC TGGCCGAAGG CTTGATCACA CTGGTGATCG AAGACGACGG CAGCGCGGCG
TTGGCGCATT ACGACCAGCG TTATCCAATC CGTCCGCAAA CACTGGAAAT TCCAGAAAAA
ACCGCACTTG CGCAGTGGCT GCGCGACTAC AACGACGGCG CCAGGCGCGG CGATGGCCGC
CTGCACAAGT TGATCGAACG TCAGCCGTAT CGCTTGAACT GGTGGCGCGT GGGCAACGAC
ATGCTCAACT ACCGCCGCTT CTTCGATATC ACCTCGCTGG TGGCATTGCG GGTGGAATTG
CCGGCGGTGT TCGATGCGGT GCACGCGCTA CCGCTGCGCC TGGTGGCCGA AGGCCATCTG
GATGGCCTGC GCATCGACCA CGTGGATGGG CTTACCGACC CCACCGGCTA TGTGCGCAAG
TTGCGCAGCC GGCTGGATGC GGCCGGCCGT ACCCGTGGCC TCAGGCCCGG CACGTTGGGC
CTGTATCTGG AAAAGATCCT CGCCCCCGGC GAGCACCTGC CGGCCGACTG GCCATGCGAT
GGCACCACCG GCTACGACTT CATGGACCAG GTAGGCGCCG TGCTGCACGA CGCGGCCGGC
TTCAAGCCAC TGGCGCGTGC CTGGCAGAAG GTGAGCGGGC GCAGCGGCGA TTTTGCACAG
GAAGAACGCA GCGCCCGCGA TGAAATCCTG CGCGGCCCGC TGCAGACCGA ATTCAATCGT
GCCGTCGGTG CGTTGTCGGC GTTGGCGCGA CTGGATCCGC CCACGCGCGA GTTCAGCCCG
CAGATGCTGG CGCGCGGGCT GTGCGTGTTG CTGCGCTGGT TTCCGGTGTA CCGCACCTAT
GCCGGTGCGC AGGGCATCAC CGGCAGCGAG GCGGAGCGTT TGCGCGCCAC TGCCGCAAAG
GCGCGCGCAG GCATGCCGGA ATCGATCGTG GCCGCCGTGG ATGCGATCGA GCGCTGGCTG
CTGGACGATG CCGGCGCCGA CCGTGCGCAG ATCGCTTTGC GGCGCATTCT GCGCCGTCGT
GTGGAACAGC TATCCGCACC GCTCAATGCC AAGTCGGTGG AAGACACCGC CTTCTACCGG
CATGGCGTGC TGCTGTCGCG CAACGAGGTC GGCAGCCACC CGACCCACTT CGCGAACGAA
GCCGCCGAGT TCCACGCGCA AAATCTCGAA CGCGCCAAGC ATTCCCCGCG TGCATTGCTG
GCCACCGCCA CGCATGACCA CAAGCGCGGC GAAGATCTGC GCATGCGGCT GGCGGTGGTG
TCTGAGCAAC CGCGTTGGTG GGCGGAGCAG AGCGCGCAAT TTGATGCGTT GGCCGACGCG
CTGGAATCGC CGGCATTGGC CGGTGGCGAC CAGCAGATGC TGTGGCAGAC CTTGGTGGCG
GCATGGCCAC TCGGCCTGGG CTCCGATCAG ACCGAGCCAC TCGCCGACTA CGCCGAGCGC
ATCGCGCAAT GGCTGCTCAA GGCGGTGCGC GAAGCCAAGC TGCACAGCAG CTGGACCGAC
GGCTCGCCGG CCTATGAGCA AGCCGTGCAG GCCACGGTAG AGCAGGTGCT GTGCAGCCCT
GCCGGGCTAC CGTTGCGGCG CGCGTTGCTG CGCGCCAGCA ACCGCATCGC CGCCGCTGGC
GCGCGCAACG CACTGGTGCA AACCACCTTG CGCCTGACCG TGCCCGGCGT ACCCGATCTG
TATCAGGGCA CCGAAGGCTG GGATCTGTCG CTGGTGGACC CGGACAACCG CCGCCCGGTG
GATTATGCCC AGCGCCAGCA ATGGCTGCAG CAAGCGCGCG ACTTCACCGG GTTGCTGCGC
AGTTGGCGCG ATGGCGCGGT CAAGGCGCGC CTCACGGCGC TGTTGCTGCA GCTACGTCGC
GAACATCCAT TGCTGTTTGC GAAGGGCGAC TATCAGCCTT TGAACGTGGC GGTCAGTGGC
GATGCGCAAG CGCTGGCGTT CCGCCGCCAG TACCGCGGGC AGTCGCTGGT GGTGGCCGTC
ACGCGGCTGG GCGCTGGCGC CGAGGGCGAG GGCGACCTGC CGTTGCTGGT GGCGCCGGCC
ACCTGGGGTC GGGCGTCGTT GGCATTGGGC GAGGGCACAT ACCGTAATGT GCTCGACGGC
AGCACGCTGC AGCCGCAGCG CGGCCGCGTG GCGCTATCCA CGCTGTTTGC ACGTGCGCCG
GTGGCAGTGT TGCTGTCCCA AGACAATTGA
|
|---|
| Protein sequence | MIDLRATARL QLHAGFTLHD ALAQLPYYAG LGISHLYLSP IGTAVPGSTH GYDNIDPTVV
NPELGGEDAL IALSQAAREH GMGLIADIVP NHMATHAQNA WWWDVLRNGR SAKHADWFDI
DWRAPGRDGK VWLAVLDRPY ATALAEGLIT LVIEDDGSAA LAHYDQRYPI RPQTLEIPEK
TALAQWLRDY NDGARRGDGR LHKLIERQPY RLNWWRVGND MLNYRRFFDI TSLVALRVEL
PAVFDAVHAL PLRLVAEGHL DGLRIDHVDG LTDPTGYVRK LRSRLDAAGR TRGLRPGTLG
LYLEKILAPG EHLPADWPCD GTTGYDFMDQ VGAVLHDAAG FKPLARAWQK VSGRSGDFAQ
EERSARDEIL RGPLQTEFNR AVGALSALAR LDPPTREFSP QMLARGLCVL LRWFPVYRTY
AGAQGITGSE AERLRATAAK ARAGMPESIV AAVDAIERWL LDDAGADRAQ IALRRILRRR
VEQLSAPLNA KSVEDTAFYR HGVLLSRNEV GSHPTHFANE AAEFHAQNLE RAKHSPRALL
ATATHDHKRG EDLRMRLAVV SEQPRWWAEQ SAQFDALADA LESPALAGGD QQMLWQTLVA
AWPLGLGSDQ TEPLADYAER IAQWLLKAVR EAKLHSSWTD GSPAYEQAVQ ATVEQVLCSP
AGLPLRRALL RASNRIAAAG ARNALVQTTL RLTVPGVPDL YQGTEGWDLS LVDPDNRRPV
DYAQRQQWLQ QARDFTGLLR SWRDGAVKAR LTALLLQLRR EHPLLFAKGD YQPLNVAVSG
DAQALAFRRQ YRGQSLVVAV TRLGAGAEGE GDLPLLVAPA TWGRASLALG EGTYRNVLDG
STLQPQRGRV ALSTLFARAP VAVLLSQDN
|
|---|
| |