| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03371 |
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| Symbol | glgX |
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| ID | 6303636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 109700 |
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| End bp | 111862 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642637430 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_001911315 |
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| Protein GI | 188574386 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.13804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACTC GCAAGTTCAC TCAGCGCTCG CGCATTCGCG AAGGCCGTCC CAACTCGCTC
GGTGCCACCT GGGACGGGCT AGGCGTCAAC TTTGCACTGT ATTCGCGCAA TGCCACCCGC
GTGGAGCTAT GTCTGTTCGA CGACCGTGGC CGCGAGCAAG AGCGCATCGC GCTCCCCGAA
TATACCGACG AGGTCTGGCA CGGCTATCTG CCCGACGCAC GTCCCGGCCA GTTGTATGGC
TATCGCGTGC ATGGGCCGTA TGCGCCCGAC GCCGGTCACC GCTTCAACCA CAATAAATTG
CTGCTGGACC CGTACGCTAA ACAGATCGTT GGCGAACTCA AATGGGCGCC GCATCTATTC
GGTTACATCA TCGGCCATCG CGACAAGGAC CTGAGCTTCG ACCGCCGCGA CAGCGCCGCG
TTCATGCCCA AATCCGCGGT GATCGACCCC GCTTTCACCT GGGGCCAGGA CCGCCCGCCG
CAAACGCCCT GGAACCGCAC GGTGATCTAC GAGGCGCACG TGCGCGGCCT GAGCATGCTG
CATCCGGCAG TGCCGCCGGA AGAGCGCGGC ACGTTCTCGG CGCTGAAGAC CGATGAGTTA
ATCGACCACA TCAGCTCGCT CGGCGTCACC GCAGTGGAAC TGCTGCCGGT GCACGCGTTC
GTCGACGACC AATATCTGCT GGAAAACGGC CTGCGCAATT ACTGGGGCTA CAACACGCTG
GGCTTCTTTG CGCCGCAAGC GCGTTACATG TCCACGCGCA CCGTGGCCGA GTTTAAGCAG
ATGGTCGCGC GGTTGCATCA CGCCGGCCTG GAAGTGCTGC TGGACGTGGT CTACAACCAC
ACTGCCGAAG GCAACGAGCT CGGCCCCACG CTTTCCTTCA AGGGGATCGA CAACGCCAGC
TATTACCGCC TGGCCGACGA TCGCCGCTTC TACATCAACG ACACCGGCAC CGGTAACACC
TTCGATCTCA CCAATGTCGG CGCGCTGCGC ATGGTGATGG ATTCGCTGCG GTACTGGGTG
CAGGAAATGC ACGTGGACGG CTTCCGTTTC GATCTGGCCA GCATCCTCGG CCGCGAGCGC
TACGGCTTCG ATCCCTCCGG CAGTTTTCTG GATGCGGTAC GCCAGGACCC GGTGCTCAGT
CAGACCAAGT TGATCGCCGA GCCGTGGGAT ATCGGCCCCG GTGGCTATCA GGTGGGCAAT
TTCCCGCCCG GCTGGGTGGA ATGGAACGAC AAGTTTCGCG ACAACGTGCG GGCGTTCTGG
CGCGGCGACG GCGGCCAGCT GGCCGAGCTG GCCACGCGCC TCACCGGCTC TGCGGATCTG
TTCAATCACA GTGGCCGCCG GCCGACCGCG TCGGTCAATT TCGTTACCGC GCACGACGGC
TTCACCCTGC GCGATCTGGT CAGCTACGAA GGCAAGCACA ACCTCGCCAA CGGCGAAGAT
GGCAGAGACG GCAGCGACCA CAACATCTCG TGCAATTACG GCGTCGAAGG CGAGACCAAC
GACCCGACCA TCAAGCAGCT GCGTCGCCAG CAGATGCGCA ATCTGCTCGC CACCTTGCTG
CTATCGCAGG GCACGCCCAT GCTGCTGGCC GGCGACGAAT TCGGCCATAG CCAGAACGGC
AACAACAACG CGTACTGCCA GGACAACGAG CTGACCTGGA TCGACTGGAC CGCCGCCACC
AAGGCTGCCG CCGCCGACCA GGCTGCCTTC GTGCGCCGAT TGATCCGCAT CCGCCAGCGC
TACCCGTTAC TGCATCGCGC GCGTTTTTTC GATGGCAAGT TCGACGAAGC GCTGGGCCTG
AAGGATCTCA CCTGGTTGGC GCCGGATGGC CACGAAATGG ACGAAGCCGG CTGGCACGAT
CCGGAAGCAC GCGCGTTGAT GCTGCGCCTG GACGGCCGCT CACCGGCCAC CGGCCTGCGT
GAGATCGCTG CCAATGTGAC GCTGCTGATG TTGATCAATG CCGCTTCCAC CAGCGTGTCG
TTCACGCTGC CGGCGATGCA CGACGAACAC TGGCGCGTGC TGGTGGACAC CGCACGCCAC
GGCGGACGCG TGGTCGCCGG CGGTAGCGAA TGGAAGGCAT CGGCGCATTC GTTGACGTTA
TTGGCGGTGG AACGCGACCG CATCATCAGC AGTGCGCGCA TCGTCTCCGA AGGCGCACGT
TGA
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| Protein sequence | MATRKFTQRS RIREGRPNSL GATWDGLGVN FALYSRNATR VELCLFDDRG REQERIALPE
YTDEVWHGYL PDARPGQLYG YRVHGPYAPD AGHRFNHNKL LLDPYAKQIV GELKWAPHLF
GYIIGHRDKD LSFDRRDSAA FMPKSAVIDP AFTWGQDRPP QTPWNRTVIY EAHVRGLSML
HPAVPPEERG TFSALKTDEL IDHISSLGVT AVELLPVHAF VDDQYLLENG LRNYWGYNTL
GFFAPQARYM STRTVAEFKQ MVARLHHAGL EVLLDVVYNH TAEGNELGPT LSFKGIDNAS
YYRLADDRRF YINDTGTGNT FDLTNVGALR MVMDSLRYWV QEMHVDGFRF DLASILGRER
YGFDPSGSFL DAVRQDPVLS QTKLIAEPWD IGPGGYQVGN FPPGWVEWND KFRDNVRAFW
RGDGGQLAEL ATRLTGSADL FNHSGRRPTA SVNFVTAHDG FTLRDLVSYE GKHNLANGED
GRDGSDHNIS CNYGVEGETN DPTIKQLRRQ QMRNLLATLL LSQGTPMLLA GDEFGHSQNG
NNNAYCQDNE LTWIDWTAAT KAAAADQAAF VRRLIRIRQR YPLLHRARFF DGKFDEALGL
KDLTWLAPDG HEMDEAGWHD PEARALMLRL DGRSPATGLR EIAANVTLLM LINAASTSVS
FTLPAMHDEH WRVLVDTARH GGRVVAGGSE WKASAHSLTL LAVERDRIIS SARIVSEGAR
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