| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03318 |
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| Symbol | gltD |
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| ID | 6303693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 171716 |
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| End bp | 173197 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642637486 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_001911371 |
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| Protein GI | 188574442 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGCA AACAAGCCTT CCAATTCCTC GACCTGCCGC GGACCATGCC CACGCGCATT
CCGGTGGAAC TGCGCACGTC CGGCGATTGG GGCGAGTTGT ACGGCAAGTT CGACAAGGCC
GAGGCGCAGT ACCAGTCCGG CCGTTGCCTG GATTGCGGCA ACCCGTATTG CAGCTGGAAA
TGCCCGGTGC ACAACGCCAT CCCGCAGTGG CTGCAGCTGG TGCAGGAAAA CCGCATCGAG
GAAGCCGCTG CGCTGTGCCA TTCCACCAAC CCGCTGCCGG AAGTGTGCGG GCGCGTGTGT
CCGCAGGACC GCCTGTGCGA AGGCAGCTGC ACGCTGGAAG AATTCGGCGC GGTCACCATC
GGTGCGGTAG AGAAATACAT CGTCGACACC GCCTTCAAGA TGGGCTGGCG TCCGGACCTG
GGCAACGTGC ACCCGACCGG CCACCGCGTG GCGGTGATCG GCGCCGGCCC GGCCGGCCTG
GCGTGTGCGG ACAGGCTGGC GCGCGCCGGC ATCGAAGCGG TGGTGTACGA CCGCTATGAA
CAAATCGGCG GGCTGCTGCA GTTCGGCATC CCCAGCTTCA AGCTGGACAA GTCGGTGATC
GGCAAGCGCC GCGAGATCCT CGAAGGCATG GGCGTGCAGT TCCGCCTGGG CGTGGAGATC
GGCCGCGACA TCAGCATCGA GCAGTTGCTG GGCGAATACG ATGCGGTGTT CCTGGGCACC
GGTGCCTACC GCTACACCGA CGGCGGCCTG CCCGGGCAGG ATCTGAAGAA CGTGCTGCCG
GCGCTGCCAT TCCTGGTGCA GAACAGCCGC ATCGTCAGCG GCAACGACCC GCACGGCCGG
CCGATCGCCG GCTGGGAAAA CCAGCTCGCC CTGCCCGACC TCACCGGCAA GCGCGTGGTT
GTACTTGGCG GCGGCGACAC CGGCATGGAC TGCGTGCGCA GCGCCATCCG CCTGGGCGCG
GCCAAGGTCA CCTGTGCCTA TCGCCGCGAC GAAGCCAGCA TGCCCGGCTC CGCACGCGAG
GTGGCCAACG CCCGCGAAGA AGGCGTGCGC TTCCTGTTCA ACCGGCAGCC GCTGTCGATC
GAATCCGGCG CCGACGACGA AGCCATCGGC GTGACCGTGG TGGAAACCAA GCTGGGTGAG
CCCGACGCCA GCGGCCGCCG CAATGCGGTG CCGGTGGAAG GCAGCGAATC GCTGCTGGAA
GCGGACGTGG TGATCATCGC CTTCGGCTTC TCGCCGAGCC TGCCCGACTG GTTGGCGTCG
CAAGGCGTGG AAGCCGGCAG CAACGGCCGC ATCGTCGCCC CGGCCGACGG CCACGGCCGC
CTGCCCTACC AGACCAGCAA CCCGCGCCTG TTCGCAGGCG GAGACTGTGT GCGCGGCGCC
GATTTGGTGG TGACTGCAGT GGCCGAGGGC CGCGACGCAG CCTGCAGCAT CGTGCAACTG
CTGGGTGTGA AAGCGCAGGT CAAGGAGCCG GCTGCGGCGT AG
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| Protein sequence | MSRKQAFQFL DLPRTMPTRI PVELRTSGDW GELYGKFDKA EAQYQSGRCL DCGNPYCSWK
CPVHNAIPQW LQLVQENRIE EAAALCHSTN PLPEVCGRVC PQDRLCEGSC TLEEFGAVTI
GAVEKYIVDT AFKMGWRPDL GNVHPTGHRV AVIGAGPAGL ACADRLARAG IEAVVYDRYE
QIGGLLQFGI PSFKLDKSVI GKRREILEGM GVQFRLGVEI GRDISIEQLL GEYDAVFLGT
GAYRYTDGGL PGQDLKNVLP ALPFLVQNSR IVSGNDPHGR PIAGWENQLA LPDLTGKRVV
VLGGGDTGMD CVRSAIRLGA AKVTCAYRRD EASMPGSARE VANAREEGVR FLFNRQPLSI
ESGADDEAIG VTVVETKLGE PDASGRRNAV PVEGSESLLE ADVVIIAFGF SPSLPDWLAS
QGVEAGSNGR IVAPADGHGR LPYQTSNPRL FAGGDCVRGA DLVVTAVAEG RDAACSIVQL
LGVKAQVKEP AAA
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