| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03307 |
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| Symbol | |
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| ID | 6308497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 5094790 |
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| End bp | 5096952 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642642213 |
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| Product | transglycolase |
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| Protein accession | YP_001916038 |
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| Protein GI | 188579109 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0676] Uncharacterized enzymes related to aldose 1-epimerase
[COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0752099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTGC CCCGGCGCGC ATTGCCGTTG GTGCTGGGAC TGCTGCCACT GGCCGCCTGC
GCCGATCCCG CCTTCGACCG CTGCCTGGCT GGCCTGCAGA CCCAGGCCGC TGCCAAGGGC
GTGGACCCTG CAGGCTTTCA GCGTTTCACC GCCGGGCTGG TGCCTGATCC CAGCGTGTTG
CCGCTGCTGG ATGCACAGCC CGAATTCACC ACGCCGATCT GGGATTACCT GGCCAGCTTG
GTCGATAACC AGCGCGTGAC CGATGGCCAG GCCATGCTGG TCACCCACCG CGCGCTGTTG
ACTCGCCTGT CCGAACAAAC CGGCGTGGAC CCGGCCACCA TCGTGGCGGT GTGGGGCGTG
GAGAGCGACT ACGGCCGCGT CACCGGCAAG CGCCCGCTGC TGGTGTCGCT GGCCACGCTG
TCGTGTGCAG GCCGCCGCCA GCCGTTCTTC CGTGACGAAT TCCTCGCCTT GCTCAGCCTG
CTGCAACGAG GCGATCTGGC TGCGGATGGG CTGACCGGCT CCTGGGCCGG CGCATTCGGG
CAGACCCAGT TCATGCCCTC GACCTACACC CGCATCGCGG TGGATGGCGA CGGCGACGGC
CGCCGCGATC TGGTCGCCAG CATTCCCGAC GCACTGGCCT CGACCGCCAA CTATCTGGTC
AAGGCCGGCT GGGAACGCGC CCGCCCGTGG GGCATGGAAG TCACGCTGCC GCGCGGGTTC
GATGCCAGCA AGGCCGGCCG CACCCGCCGC CAACCGCTGC AGGCCTGGCA AACCGCCGGC
CTGCTCGGCA CCGACGGCAA ACCGCTGGCA CCGATCGGGT TGCCGGCGGA GACCCCCGCC
GCCTTGCTGC TGCCGGCCGG CGCCACCGGC CCGGCGTTCC TGGTGTTCCG CAACTACGAC
GCCATTTATG CTTACAACGC CGCCGAAAGT TACGCGCTGT CCATCGCCCT GCTCGCCGAC
CGCCTGCGCG GCGGCCCCGG CCTGATTGCC ACCTGGCCCA CCGACGACCC GGGCCTGGGG
CGGCCCGAAC GGCGCGAACT GCAGCAGTTG CTGCTCGCCC GCGGCTACCA GATCGGCGAG
GCCGACGGCA TGGTCGGCAG CGCCACCCGC CGTGCCATCC AGGTCGAGCA GATCCGCCTG
GGCCTGCAAC CGGCCGACGG CCGTCCCGGC CAACGCATCC TCACCGCCCT GCGCGCCGCG
CCGCCGCTCG CCGGCGTTGC GGCCGTTCGC GCCACCGCCT TCAAGCTGCC GACCGCATAC
CCGGCCTTCG CCCAATCCGC CATCGTCCAT AAGGCATCCC CCATGTCCGA CACCACCGGC
CTGACCACAG GCGATTTCCA CGGCTTTCCA TCGCTGCTGA TCGAAACGCC GTTCTCCACC
GCGGCCATCA GCCTGTTCGG CGGGCAACTC GTGTCGTTCG TGCCCAAGGG CGGCCAAGAC
GTGATGTGGC TGTCGCCGCT CGCCAAGCAG CCGCCCACCC CGATCCGCGG TGGTGCGCCG
GTGTGCTGGC CGTATTTCGG TCGCCAGGGC CAGATCGGCG ATGTCCCCGC CCACGGCTTC
GTCCGCACCG TGGCCTGGCG ACTCACCGAA AGCCGCCGCG AAGACGACGG CACCGTGGTG
CTCACGCTCA CCCCGCCGCG CTTGGACGAC CTGGCGTTGC GCCTGCGCAT GACGCTGCGC
ATCGGCCGCA CGCTTGAGCA ACGCCTGATC ACTGAAAACA CCAGCGCCGC CCCGGTGCGT
TTCACCCAGG CGCTGCACAA CTATTTCCGC GTCGGCGACG CGCTGAAGAT CAGCGTGCAG
GGCCTGGATG GCCTGGACTA CCTCGATAAA TACGAGAACT ACGCTACCGC ACACCGTCAG
CAAGGCGACT GGAGCCTGCG CGACCCACGC GATCCCGGCC GCAGCGACCG TATCTACACC
AATGCCGGTG GCCGCTACAC GCTCACCGAC CCGGTGCTCG GCCGCCGCAT CGTCATCGCC
ACCGAAGGCA GCCGCTCGCT GGTGGCTTGG AATCCGGGCG AAGAGGCCGG CAAGAAGATG
GCCGACGTGG GCGACGGCTG GCGCGACTAC GTCTGCCTGG AAGCGGCCAA CGCCGGCCCG
GATGTGATCG AACTCGCCCC CGGCGCCAGC CACACCCTGA CCCAGACCAT CAGTGTCGAG
TAA
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| Protein sequence | MTLPRRALPL VLGLLPLAAC ADPAFDRCLA GLQTQAAAKG VDPAGFQRFT AGLVPDPSVL
PLLDAQPEFT TPIWDYLASL VDNQRVTDGQ AMLVTHRALL TRLSEQTGVD PATIVAVWGV
ESDYGRVTGK RPLLVSLATL SCAGRRQPFF RDEFLALLSL LQRGDLAADG LTGSWAGAFG
QTQFMPSTYT RIAVDGDGDG RRDLVASIPD ALASTANYLV KAGWERARPW GMEVTLPRGF
DASKAGRTRR QPLQAWQTAG LLGTDGKPLA PIGLPAETPA ALLLPAGATG PAFLVFRNYD
AIYAYNAAES YALSIALLAD RLRGGPGLIA TWPTDDPGLG RPERRELQQL LLARGYQIGE
ADGMVGSATR RAIQVEQIRL GLQPADGRPG QRILTALRAA PPLAGVAAVR ATAFKLPTAY
PAFAQSAIVH KASPMSDTTG LTTGDFHGFP SLLIETPFST AAISLFGGQL VSFVPKGGQD
VMWLSPLAKQ PPTPIRGGAP VCWPYFGRQG QIGDVPAHGF VRTVAWRLTE SRREDDGTVV
LTLTPPRLDD LALRLRMTLR IGRTLEQRLI TENTSAAPVR FTQALHNYFR VGDALKISVQ
GLDGLDYLDK YENYATAHRQ QGDWSLRDPR DPGRSDRIYT NAGGRYTLTD PVLGRRIVIA
TEGSRSLVAW NPGEEAGKKM ADVGDGWRDY VCLEAANAGP DVIELAPGAS HTLTQTISVE
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