Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03252 |
Symbol | actP |
ID | 6308556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 5140059 |
End bp | 5141747 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642642270 |
Product | acetate permease |
Protein accession | YP_001916095 |
Protein GI | 188579166 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTGCCTG CGGGCATCGC GCTGGCAGCC GGCGGTGAGA TTGGCCAGGT CGACAAGCAG CCCACCAACT GGGTGGCGAT CGGCATGTTC GGCTTCTTCG TGCTGGGCAC CTTGTGGATC ACCAAGTGGG CGGCGGCCAA GACCAAGTCG GCCGCCGACT TCTATACCGC CGGTGGCAGC ATCACCGGTT TCCAGAATGG TCTGGCCATT GCCGGTGACT ACATGTCGGC GGCCTCGTTC CTGGGAATTA CCGCGGCAGT GATGGCCAAC GGCTACGACG GTCTGATCTA CGCGATCGGC TTTCTGGTCG GCTGGCCGAT CCTGACCTTC CTGATGGCCG AACGGCTGCG CAACCTCGGC AAGTACACCT TCGCCGACGT GGCCGGTTAC CGCTTCGCGC CGACCGCAAT CCGCAGCTTT GCGGCGTCGG GCACGCTGGT GGTGGTGCTG TTCTATCTGA TCGCGCAGAT GGTCGGTGCC GGTGCCTTGA TCAAGCTGTT GTTCGGTCTG GACTACTGGA TCGCAGTGAT CATGGTCGGC GTGCTGATGA TGATCTACGT GCTGTTCGGC GGCATGACCG CAACGACCTG GGTGCAGATC ATCAAGGCCG TGTTGCTGCT GACCGGCGTG ACCTTCATGG CCGTGGCAAT CATGTGGCAC TTCAACTTCA GCTTCGAGGC GCTGTTTGCC GAGGGCGTGC GGGTGAAGAC GGCGATTGCG GCCAACGGCG GTGCATCGGC GGCGGACGCG GCAAAAGCAG GCCTGGCGAT CATGGGGCCG GGCGGTTTCG TGAAGGACCC GATTTCGGCG ATTTCCTTCG GCATGGCGTT GATGTTCGGT ACCGCCGGCC TGCCGCACAT CCTGATGCGC TTCTTTACCG TTCCCGATGC CAAGCAGGCA CGCAAGTCGG TGCTGTGGGC GACCACCTGG ATTGGCTACT TCTACATCCT GATCTTCATC ATTGGCTTCG GTGCCATCGC ACTGGTGTTG ACCAACCCGC AGTTCGCCGA TGTCGTCACC GGCACCATCC ACGGCGGCAA GGGCGCGGCC AACATGGCGG CAGTGCTGGT CGGCAATGCA GTGGGCGGCA ACGTGTTCAT GGGCTTCATC TCGGCGGTGG CCTTCGCCAC CATCCTGGCG GTGGTTGCGG GTCTGACCCT GTCCGGCGCC TCGGCGGTGT CGCATGACCT GTACGCCACG GTGATCAAGC AGGGCAACCC GGCGCCTGGC TCCGAGCTCA AGGTCTCGCG TGCCACCACC CTGGTGCTGG GCGTGATCGC GGTGCTGCTG GGCATCGTGT TCGAGAAGCA GAACGTGGCC TTCATGGTGT CGCTGGCCTT CGCCATCGCC GCCTCGGCCA ACTTCCCGGT GCTGATCCTG TCGTTGCTGT GGAAGAACTG CACCACCCGT GGCGCAGTGA CCGGTGGTTT CCTCGGCCTG ATCTCCTCGC TGGTGCTGAC GATCCTGTCG CCGTCGGTGT GGGTGGACAC GCTGGGCAAT GCGGCCGGCT CGGCGCCGTT CCCGTACACC TCGCCGGCAT TGTTCTCGAT GACGATTGGT TTTGTCGGCA TCTGGCTGTT CTCGATCCTG GACCACAGCC CGCAGGCGGC CAACGAACGC GCAGCGTTCA AGGCGCAGCA GATCCGTGCC GAAACCGGCC TGGGTGCCAG CGGTGCATCC GGTCACTGA
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Protein sequence | MLPAGIALAA GGEIGQVDKQ PTNWVAIGMF GFFVLGTLWI TKWAAAKTKS AADFYTAGGS ITGFQNGLAI AGDYMSAASF LGITAAVMAN GYDGLIYAIG FLVGWPILTF LMAERLRNLG KYTFADVAGY RFAPTAIRSF AASGTLVVVL FYLIAQMVGA GALIKLLFGL DYWIAVIMVG VLMMIYVLFG GMTATTWVQI IKAVLLLTGV TFMAVAIMWH FNFSFEALFA EGVRVKTAIA ANGGASAADA AKAGLAIMGP GGFVKDPISA ISFGMALMFG TAGLPHILMR FFTVPDAKQA RKSVLWATTW IGYFYILIFI IGFGAIALVL TNPQFADVVT GTIHGGKGAA NMAAVLVGNA VGGNVFMGFI SAVAFATILA VVAGLTLSGA SAVSHDLYAT VIKQGNPAPG SELKVSRATT LVLGVIAVLL GIVFEKQNVA FMVSLAFAIA ASANFPVLIL SLLWKNCTTR GAVTGGFLGL ISSLVLTILS PSVWVDTLGN AAGSAPFPYT SPALFSMTIG FVGIWLFSIL DHSPQAANER AAFKAQQIRA ETGLGASGAS GH
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