| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03243 |
|---|
| Symbol | gidB |
|---|
| ID | 6308566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 5149280 |
|---|
| End bp | 5149918 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642642280 |
|---|
| Product | 16S rRNA methyltransferase GidB |
|---|
| Protein accession | YP_001916105 |
|---|
| Protein GI | 188579176 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
|---|
| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATG CCGCACTTGC CCCCGATGTC TCCGCCGCGC TCGAACGCGG CCTGCAGGCC
CAATCCCTGG ATACGGCGTT CGCCGCACCG CTGCTGCGCT ACCTGGCCTT GCTGGTGCGC
TGGAACAAGA CCTACAACCT CACCGCCGTG CGCGACCCGC GCGCGATGGT CACCCGCCAC
CTGCTCGATT CGCTGGCCAT GCAGCCCTAC ATCGCCAGCG GCATGCTGGC CGACCTGGGC
ACCGGCCCCG GCCTGCCCGG CATCCCATTG GCGATCACCC GCCCGCAGTT GCAAGTGACG
CTAGTGGAAA GCAACGGCAA GAAGGCGCGC TTCATGCGCG AAGCCTTGCG CCATCTGGAA
CTGCGCAACG CCCGCGTGGC CGAATCGCGC GCCGAAGCGC TGGACGAGCC AACTGCCTAC
GACCACCTCA CCGCGCGCGC GCTGGACACG CTGGCCGGCA TCATCGCCGT CGGCGGCCAC
CTGCTGCGCC CGGGCGGCAG CTTGTTGGCG ATGAAGGGCA TCTATCCGCA CGAAGAAATC
GCCGCACTGC CCGAAGGCTG GACGATGAGC GAGGTACACC AGCTGCAGGT GCCCGGCCTG
GACGGCGAGC GGCATCTGGT GGTGGTGCGC AAGGCCTGA
|
|---|
| Protein sequence | MNDAALAPDV SAALERGLQA QSLDTAFAAP LLRYLALLVR WNKTYNLTAV RDPRAMVTRH
LLDSLAMQPY IASGMLADLG TGPGLPGIPL AITRPQLQVT LVESNGKKAR FMREALRHLE
LRNARVAESR AEALDEPTAY DHLTARALDT LAGIIAVGGH LLRPGGSLLA MKGIYPHEEI
AALPEGWTMS EVHQLQVPGL DGERHLVVVR KA
|
|---|
| |