| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03230 |
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| Symbol | uvrD |
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| ID | 6308578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 5160418 |
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| End bp | 5162604 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642642292 |
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| Product | DNA-dependent helicase II |
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| Protein accession | YP_001916117 |
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| Protein GI | 188579188 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATGTCT CTCATTTGCT CGATCATCTA AACCCCGCCC AGCGCGAGGC CGTTTCCGCG
CCGCCGGGGC ATTACCTCGT CCTGGCCGGC GCCGGCTCCG GCAAGACGCG CGTGCTGATC
CATCGCATCG CCTGGCTCAA CGAAGTCCAG GGCGTGCCCA ATCACGGCAT CTTCGCGGTG
ACCTTCACCA ACAAGGCCGC CGGCGAAATG CGCCACCGCA CCGACCTGCA GCTGCGCAAT
GGCAGCCGCG GGATGTGGAT CGGCACCTTC CATGGGTTGG CCCATCGCCT GCTGCGTCTG
CATTGGCAGG ACGCGCGGTT GCCGGAAGGC TTCCAGGTCA TGGACAGCGA CGACCAGTTG
CGGCTGGTCA AGCGCGTGGT GCAGGCGCTG GAGCTGGACG AGAGCAAGTA TCCGCCCAAG
CAACTGAGCT GGTGGATCAA CGAGCAGAAG GACGAAGGCC GCCGTCCGCA GCATATCCAG
CCCGAGCCCA ACGACGATTG GACCGAGGTG CGCCGTCAGG TGTATGCGGC CTACCAGGAA
CGCTGCGACC GCTCCGGGTT GCTGGATTTC GCCGAATTGC TGCTGCGCGC GCACGAGTTG
CTGCGCGACA CGCCCGCGTT GCTGGCGCAT TACCGCGCGC GCTTCCGCGA GATTCTGGTG
GACGAGTTCC AGGACACCAA CGCCATCCAG TACGCCTTCG TGCGCGTGCT GGCCGGTGAA
TCGGGCAACG TGTTCGTGGT GGGCGACGAC GACCAGGCCA TCTATGGCTG GCGCGGCGCC
AAGGTCGAGA ACGTGCAGCG CTTCCTGAAG GATTTCCCCG GCGCGCAGAC CGTGCGGCTG
GAGCAGAACT ACCGCTCCAG CGCCAATATC CTGGGCGCGG CCAATGCGGT GATCGCGCAC
AACCCGGACC GGATCGGCAA ACAGCTGTGG ACCGATTCCG GCGATGGCGA CCCGATCGAT
CTGTATGCGG CCTATAACGA AGTCGACGAG GCGCGCTACA TGGTCGAGCG CGCGCGCCAG
TGGGTGCGCG ACGGCGGTAG TTATGGCGAA TTAGCCGTGC TCTACCGCAG CAACGCGCAA
TCGCGCGCGC TGGAAGAAGC GCTGATCTCC GCGCAGTTGC CGTACCGCGT ATATGGCGGC
ATGCGCTTCT TCGAACGCGC CGAAATCAAG GACGCATTGG CGTATCTGCG CCTGCTCACC
AACCGCAGCG ACGATGCGGC CTTCGAGCGC GCGGTGAATA CGCCTACGCG CGGCATCGGC
GATCGCACGT TGGATGAAGT GCGCCGGTTG GCGCGCGCCA ATGCGCTGTC GTTGTGGGAA
GCGGCGATGC TGTGCACGCA GCAGAACACG CTGGCCGCAC GCGCACGCAA CGCGTTGGCG
ACCTTCCTCA GCCTGGTCGG TCAGCTGCAC GCCGAAACCG GCGAGATGGA ACTGGCCGAA
CGTATCGACC ACGTGCTGAT GCGCTCGGGC CTGCGCGAAC ATTGGGCCAA GGAAAGCCGC
GGCGGACTGG ATTCGGAATC GCGCACCGAG AACCTGGACG AACTGGTCTC GGTCGCCTCG
CGCTTCACAC GCCCGGACGA TGAAGACAGC CAGGGCATGA CGGAGCTGGT CGCCTTCCTC
GCTTACGCAT CGCTGGAAGC CGGCGAAGGC CAGGCGCAGG CCGGCGAAGA AGGCATGCAA
CTGATGACGC TGCATTCGGC CAAGGGCCTG GAGTTTCCGA TCGTGTTTTT GGTCGGCCTG
GAAGACGGCT TGTTCCCGAG CGCGCGCTCG TTGGAAGAGA GTGGGCGGCT GGAAGAAGAG
CGTCGCCTGG CGTACGTCGG CATCACCCGC GCGCGGCAGA AGCTGGTGTT GTGCTACGCC
GAATCGCGCC GCATCCATGG CCAGGACAAC TACAACGTGC CGTCGCGCTT TCTGCGCGAA
ATCCCGCGCG ATCTGCTGCA TGAAGTGCGC CCGAAGGTGC AGGTCTCGCG CACCGCCTCG
CTGGGCGCGG CACGCGGCGG GCCGGTGCAT GGTGTGGTGG AAGCGGCACC GATCACGCTC
GGCGCCAACG TCGAACACCC CAAGTTCGGC GGCGGCGTGG TCGTGGACTA CGAAGGCGCT
GGCGCGCATG CGCGCGTGCA GGTGCAGTTC GATGAAGTCG GCGTCAAGTG GCTGGTGATG
GCTTACGCCA ATCTGACGGT TGTGTAG
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| Protein sequence | MDVSHLLDHL NPAQREAVSA PPGHYLVLAG AGSGKTRVLI HRIAWLNEVQ GVPNHGIFAV
TFTNKAAGEM RHRTDLQLRN GSRGMWIGTF HGLAHRLLRL HWQDARLPEG FQVMDSDDQL
RLVKRVVQAL ELDESKYPPK QLSWWINEQK DEGRRPQHIQ PEPNDDWTEV RRQVYAAYQE
RCDRSGLLDF AELLLRAHEL LRDTPALLAH YRARFREILV DEFQDTNAIQ YAFVRVLAGE
SGNVFVVGDD DQAIYGWRGA KVENVQRFLK DFPGAQTVRL EQNYRSSANI LGAANAVIAH
NPDRIGKQLW TDSGDGDPID LYAAYNEVDE ARYMVERARQ WVRDGGSYGE LAVLYRSNAQ
SRALEEALIS AQLPYRVYGG MRFFERAEIK DALAYLRLLT NRSDDAAFER AVNTPTRGIG
DRTLDEVRRL ARANALSLWE AAMLCTQQNT LAARARNALA TFLSLVGQLH AETGEMELAE
RIDHVLMRSG LREHWAKESR GGLDSESRTE NLDELVSVAS RFTRPDDEDS QGMTELVAFL
AYASLEAGEG QAQAGEEGMQ LMTLHSAKGL EFPIVFLVGL EDGLFPSARS LEESGRLEEE
RRLAYVGITR ARQKLVLCYA ESRRIHGQDN YNVPSRFLRE IPRDLLHEVR PKVQVSRTAS
LGAARGGPVH GVVEAAPITL GANVEHPKFG GGVVVDYEGA GAHARVQVQF DEVGVKWLVM
AYANLTVV
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