| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03228 |
|---|
| Symbol | |
|---|
| ID | 6308580 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 5163585 |
|---|
| End bp | 5164601 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642642294 |
|---|
| Product | ISXo5 transposase |
|---|
| Protein accession | YP_001916119 |
|---|
| Protein GI | 188579190 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGAGCCG ACCGGTCGAT GGTAGGACCG TCGCTCCACC GAGACCAGAT CATGGCCATG
AATCGTGTGC AGTTCCAAGC CGGGCTGTCG TTGCCGGCGT TCCTCAAGCG CTATGGCAAC
GCGCAGCAGT GCGAGCAGGG GTTGGAGATC TCGCGCTGGC CACAGGGCTT TGTTTGTCCG
CGTTGCGCCG CTACCGCGCA CAGTCGATTC CAGCGTCACG GCACCACGTA CTGGCAGTGC
ACGGCCTGCT ATCGCCAGAC CAGCCTGCGC TCGGGCACGG TGATGGACAA CAGCAAGCTG
CCGCTACGCA CCTGGCTGCT TGGCATGTAT CTGCTGGGCC AGAGCAAGAC GAACCTGTCG
GCGCTGGAGT TGATGCGACA CCTGGGATTG AGCTACCCGA CAGCGTGGCC AATGAAGCAC
AAGCTGATGC AGGCCATGAC CCAACGCGAG GCGAACCGCA AGTTGGGCGG GATCGTGCAA
CTGGACGATG CCTACCTGGG CGGAGAACGC AACGGTGGCA AGGCCGGGCG CGGCTCGGAG
AACAAGCGCC CTTTCGTGAT CGCCGTGGAG ACCACTGAAG ACGGTCGTCC ATTGCGCGCG
GTGATGGATC CGGTCCCAGG CTTCACCAAG GCGGCGCTGT CGGAATGGAT CGGGCAACGC
CTGCATCCTG GAGCAGATGT CTACAGTGAT GGACTCGGTG CGTTTCGAGC ACTGGAAGCC
GAGCACGCGC ACACGGTGAT CGAAGGCAGC GGTCGAAGTC GCTGCGAGGC AGAGAACGCA
CGCTGGGTCA ACGTGGTGTT GTCCAACCTA AAGCGTTCGC TGGACGGTGC CTATCACGCC
TTCAAATTCG CCAAATACGC CCAGCGCTCC CTGGCAGAGA CGATGTGGCG GTTCAACCGC
CGTTTCGATC TGACCCGGCT GGTGCCCAGC TTGCTGGCCG CCGCAGCCGC CAGCAAGCCG
TGGTCCGAGC GGGCCCTGCG TGATGTCACC CTGTTCACCG CTGAAAGTGC GTGCTAA
|
|---|
| Protein sequence | MRADRSMVGP SLHRDQIMAM NRVQFQAGLS LPAFLKRYGN AQQCEQGLEI SRWPQGFVCP
RCAATAHSRF QRHGTTYWQC TACYRQTSLR SGTVMDNSKL PLRTWLLGMY LLGQSKTNLS
ALELMRHLGL SYPTAWPMKH KLMQAMTQRE ANRKLGGIVQ LDDAYLGGER NGGKAGRGSE
NKRPFVIAVE TTEDGRPLRA VMDPVPGFTK AALSEWIGQR LHPGADVYSD GLGAFRALEA
EHAHTVIEGS GRSRCEAENA RWVNVVLSNL KRSLDGAYHA FKFAKYAQRS LAETMWRFNR
RFDLTRLVPS LLAAAAASKP WSERALRDVT LFTAESAC
|
|---|
| |