| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03192 |
|---|
| Symbol | |
|---|
| ID | 6307989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 4603474 |
|---|
| End bp | 4604697 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642641716 |
|---|
| Product | ISXoo8 transposase |
|---|
| Protein accession | YP_001915553 |
|---|
| Protein GI | 188578624 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCAACCA TGCGCGCCAG CGAAGTATTG CAGAAGTGCC TGTCTAACTC ACTCTCCGGG
ATGCATGCAT TACGCCAACG CGCCTTGCTA CGCGCGGTTG AAGCGCTGGT GCACGGAGGC
CGGCTGACGC TGATCGACAT CGCACGCGCG TGGCCCGGCG CGAGGCGGGT ACGTGCGCCC
CTCAAGGCAT GCGACCGCCT GCTGTGCAAT CGCGCGTTGC AGGTCGAGCG ATCAGCCATC
GAGCGGGACA TGGCGCATTG GCTACTGCGC GGCGACCAGC CGGTGATCGT CATCGACTGG
AGCGATTTGA AGCCGGACAA GTCGTGGTGT CTGCTGCGCG CAGCCGTGCC GGTCGGTGGA
CGCACGCTCA CCTTGCTGGA TATGGTGGTT TCCGGGAAAC AGCAGGGATC GCCAGGCGCG
GAGAAACGCT TTTTGCAGCA GCTCAGGGCA CTGATTCCAG ACGATGTGCG TCCGATCCTG
GTCACGGATG CCGGATTCCG CACGCCATGG TTTCGCGCGG TGTCGGCGAT GGGCTGGGAT
TGGGTCGGAC GTCTGCGCGG ACGTACGCAG GTCAAACCGC AAGACGTGCC CGATGATGCA
GTGCAATGGA TCGATAGCCG TCGCCTGCAT GCGCTGGCGT CCAACCGTGC GCGCGAATTG
CCGCCGATGC AGGCCAATCG CAGCGATCCG CTCGATTGCC GTCTGGTGCT CTATGCCAAG
ACACGCCAGG GACGTCAGCA ACGCAACCGG CGCTCACCCG CCAAGGTCTC GCGTGCATCA
TCCAGTTTGA AAGCCGCAGC GCGTGAGCGC GAGCCGTGGT TGATCGTTGC CTCCCCACAG
CTACACGCAC CCAGCGCAAA GCAATTGGTC AACCTGTACG CACGACGGAT GCAGATCGAG
CTGGCATTTC GTGATCTGAA GTCGCACCGC TACGGTCAGG CGATGGAAGA CAGCCTGACC
CGTCGCGGCG AGCGGTTGCA GATCCTGTTG TTGCTCAACA CGCTGGCCAC CTTCGCCAGT
TGGCTGGCAG GACTGGGATG CGAAGCCACC GGTATCGCCC AGTGGCTATC TCCACGCAGC
AGCACACGCA AACTCTACTC GACGCTGCGC GTCGGCCGCG AGGCGCTGGT CAGGTGCTGG
CCGATGGAAC CAGTCTCACG CTGGCTAGAA CGCTTGCGCG CGCTGCCCGA CGCAGTGCGC
GAGCAGATGA CATTGGTGCT TTAA
|
|---|
| Protein sequence | MPTMRASEVL QKCLSNSLSG MHALRQRALL RAVEALVHGG RLTLIDIARA WPGARRVRAP
LKACDRLLCN RALQVERSAI ERDMAHWLLR GDQPVIVIDW SDLKPDKSWC LLRAAVPVGG
RTLTLLDMVV SGKQQGSPGA EKRFLQQLRA LIPDDVRPIL VTDAGFRTPW FRAVSAMGWD
WVGRLRGRTQ VKPQDVPDDA VQWIDSRRLH ALASNRAREL PPMQANRSDP LDCRLVLYAK
TRQGRQQRNR RSPAKVSRAS SSLKAAARER EPWLIVASPQ LHAPSAKQLV NLYARRMQIE
LAFRDLKSHR YGQAMEDSLT RRGERLQILL LLNTLATFAS WLAGLGCEAT GIAQWLSPRS
STRKLYSTLR VGREALVRCW PMEPVSRWLE RLRALPDAVR EQMTLVL
|
|---|
| |