Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03183 |
Symbol | |
ID | 6307998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 4611636 |
End bp | 4612748 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642641725 |
Product | ABC transporter permease |
Protein accession | YP_001915562 |
Protein GI | 188578633 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAAC CGCAACCTCC ACGCATCGAA CAAGACTCGC AGGATCAGGC GCAGCTCCGC CTCGCTGGCA GTTGGGTCCT GGCGACCGCC CTGCCCCAGG CAGAATTGCT ACAGACCGTG CCCGACGGGG TGCGCCGCAT CGACGCGCGC GGCATCCAGC AGCTGGATTC GGCAGGCGTG CTGCAGTTGC TGCGCTTTGC CAGCCGGATT GGACTGAAGG AAGACGCGAT CGATTTCCGC GATGAGCATC AGGCGCTGGT GTGCACCATC GAGGAGCTCA ACGACGAGCG CCCCAAGCCC AAACGCGATT ACGGCTTCGT CGCTGCGCTC GACCGCCTGG GTCGGGCCAC CCACCGCATC GGCCAGGACA TCCTGGAGTT GAACAGTTTT CTGGGCGAAA ACCTGGTCAA GATCATGCGG CTGATCCACG AGCCGCGCCG TTTCCGGCTC ACCTCCACCG TGCACCACAT GGAGCAGGTG GGCCTGGATG CGGTGCCGCT GGTGGTGCTG CTGTCGTACC TGGTGGGCGC GGTGATCGCG TTCCTGGGCT CGACCATCCT GCGCGACTTC GGCGCGGAAA TTTACGTGGT GGAGCTGGTC AGCATCGCCT TCCTGCGCGA ATTCGCCGTG CTGCTCACCG CCATCGTGCT GGCCGGGCGC ACCGCCAGCG CGTTTACCGC GCAGATCGGT GCGATGAAGT CGCGCGAAGA GGTCGATGCC ATCCGCACCC TGGGCCTGGA CCCGATCGAC CTGCTGGTGA TTCCGCGCCT GCTCGCGCTG ATCTTCACCC TGCCGCTGCT GACCTTCATC GCGATGATCG CCGGCCTGGC CGGTGGCGTC ACCGTGGGTG CGTTCGACCT GGATATCCCG CCGCAGATGT ACCTGGCGCG CATGCACGAG ACCATCCAGC TGCGGCATTT CCTGGTCGGG CTCTCGAAAG CACCGTTGTT TGCGCTGGTG ATCGGCCTGA TCGGCTGCCT GGAAGGCTTG AAGGTCAGCG GCACCGCGCA ATCGGTGGGC GAACGCACCA CCTCCTCGGT GGTGCAGACG ATTTCCTTGG TCATCATCCT CGACGCGATT GCGGCGTTGT GGTTCATGAA GATGGGGTGG TGA
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Protein sequence | MIKPQPPRIE QDSQDQAQLR LAGSWVLATA LPQAELLQTV PDGVRRIDAR GIQQLDSAGV LQLLRFASRI GLKEDAIDFR DEHQALVCTI EELNDERPKP KRDYGFVAAL DRLGRATHRI GQDILELNSF LGENLVKIMR LIHEPRRFRL TSTVHHMEQV GLDAVPLVVL LSYLVGAVIA FLGSTILRDF GAEIYVVELV SIAFLREFAV LLTAIVLAGR TASAFTAQIG AMKSREEVDA IRTLGLDPID LLVIPRLLAL IFTLPLLTFI AMIAGLAGGV TVGAFDLDIP PQMYLARMHE TIQLRHFLVG LSKAPLFALV IGLIGCLEGL KVSGTAQSVG ERTTSSVVQT ISLVIILDAI AALWFMKMGW
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