Gene PXO_03179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_03179 
Symbol 
ID6308003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand- 
Start bp4615797 
End bp4616405 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content66% 
IMG OID642641730 
ProductDNA repair system specific for alkylated DNA 
Protein accessionYP_001915567 
Protein GI188578638 
COG category[L] Replication, recombination and repair 
COG ID[COG3145] Alkylated DNA repair protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.204003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTC GGGTGGCATT GCCGGGGGCG GAGATCGACT GGTGGCGCGG TTGGCTGCCG 
CACGCGCAGG CCGATGCGCT GATGCAGGCG CTGCTTGTGC AGGCGCACTG GCAGCTGCAC 
CGCATCCGAA TGTTCGGGCG CATGGTGGAT TCGCCGCGCT TGAGCAGTTG GATCGGCGAT 
CCGGAGGCGA GTTATCGCTA CTCGGGCACA CGCTTCTCGC CACAGCCGTG GCTGGAGGTG 
CTGCAGCCAG TGCGTCTGCG CCTGGAGGAC GAGACCGGTC ACCGGTTCAA CAGCGTGCTG 
ATTAACCGCT ACCGCAGTGG CAGTGATGCG ATGGGCTGGC ACAGCGACGA CGAGCCGGAA 
CTGGGCGCGC AGCCATTGAT TGCCTCAGTG AGCCTGGGCG CGAGGCGACG TTTCGCATTC 
AAGCATCGCG ACGATGCGTC GGTGAAGCAG GCGTTGGAAC TGGGCCACGG CGATCTGTTG 
TTGATGGGCG GCCAGACCCA GCGCCACTAC AGACACGCCC TGCCGCGCAC CGCGAAGCCG 
GTTGGCGAGC GCATCAATCT GACCTTTCGT CAGGTCGCGG GTGCGCGTGT GCCAGCCATA 
CGCGGCTAG
 
Protein sequence
MKIRVALPGA EIDWWRGWLP HAQADALMQA LLVQAHWQLH RIRMFGRMVD SPRLSSWIGD 
PEASYRYSGT RFSPQPWLEV LQPVRLRLED ETGHRFNSVL INRYRSGSDA MGWHSDDEPE 
LGAQPLIASV SLGARRRFAF KHRDDASVKQ ALELGHGDLL LMGGQTQRHY RHALPRTAKP 
VGERINLTFR QVAGARVPAI RG