| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03176 |
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| Symbol | lpsJ |
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| ID | 6308006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 4620312 |
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| End bp | 4620941 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642641733 |
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| Product | succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B |
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| Protein accession | YP_001915570 |
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| Protein GI | 188578641 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.303462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTGGA CCAGAGACCA GATGGCCGCA CGCGCGGCAC GCGAACTGAC CGATGGCGCT
TACGTCAACC TGGGTATCGG CTTGCCGACG TTGGTTGCCA ATCACATCCC CGACGGTGTG
GATGTCTGGC TGCAATCGGA GAACGGCCTG CTCGGCATTG GCCCGTTTCC CACCGAAGAC
GAGGTGGACG CGGACCTGAT CAATGCGGGC AAGCAGACCG TGACCGCGCG TGCCGGTGCC
AGTTATTTCG GTAGCCACGA TTCGTTCGCG ATGATCCGTG GCGGGCACAT CGACCTGGCG
ATTTTGGGCG CAATGCAGGT CACCGAGCGC GGCGACCTGG CCAACTGGAT GGTGCCCGGC
AAAATGGTCA AGGGCATGGG CGGTGCGATG GACCTGGTGG CCGGCGTCAA GCGCGTGGTG
GTGTTGATGG AGCACGTCGC CAAAGACGGC AGCCACAAGA TCCTGCGCGA CTGCGACCTG
CCACTGACCG GCGTCGGCGT GGTGGATCGC ATCATTACCG ATCTCGCCGT GTTCGATGTC
ACTGCGGATG GGCTGGTACT GGTGGAATCT GCAGAGGGTG TGGAGCTGGA AGAGTTGCGC
CAGAAGACTG GGGTTGAATT CGCTGCGTGA
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| Protein sequence | MAWTRDQMAA RAARELTDGA YVNLGIGLPT LVANHIPDGV DVWLQSENGL LGIGPFPTED
EVDADLINAG KQTVTARAGA SYFGSHDSFA MIRGGHIDLA ILGAMQVTER GDLANWMVPG
KMVKGMGGAM DLVAGVKRVV VLMEHVAKDG SHKILRDCDL PLTGVGVVDR IITDLAVFDV
TADGLVLVES AEGVELEELR QKTGVEFAA
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