| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03175 |
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| Symbol | lpsI |
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| ID | 6308007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 4620941 |
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| End bp | 4621675 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642641734 |
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| Product | succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A |
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| Protein accession | YP_001915571 |
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| Protein GI | 188578642 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.840369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATGCGCA ATGAAGTAAG CGGTGCGGCA AGCGGCAAAC GCTATGCCGA TGCCAAGACA
GCGCTGGATG GGGTACTGGC CGATGGTCAG ACCCTGGCAG TGGGCGGCTT TGGGTTGTGT
GGCATTCCGG AGGCACTGAT TGCAGCCCTA CGCGACAGTG GGGTCGCCGG GTTGACCGTG
ATCTCCAACA ACGCTGGCGT CGACGGTTTC GGGCTTGGTC AATTATTGGC TACCCGACAG
ATCCGCAAGA TGATTTCGTC CTATGTGGGC GAAAACAAGG AATTCGAACG CCAATACCTG
GCAGGCGAAC TTGAGCTGGA GTTCAATCCG CAAGGCACCC TGGCCGAGCG TTTGCGCGCG
GGCGGGGCGG GAATTGCTGC GTTTTATACG GCCACCGGCT ACGGCACGAT CGTGGCCGAG
GGCAAGGAAA CGCGCGAATT CGACGGCAAG CACTACGTGC TGGAAACCGC ACTGCACGCC
GATGTGGCGC TGGTGAAGGC ATGGCGCGCC GATACCGCGG GCAACCTGGT GTTCCGCAAG
ACGGCACGCA ATTTCAATCC GGCCTGCGCC ATGGCGGGTC GCGTGTGCAT TGCCGAGGTG
GAGGAGATCG TTGAGCTGGG CGTTATCGAC CCGGATCAGG TGCATCTGCC CGGTATTTAC
GTGGACCGCC TGGTGCTCAA TGCCACGCCG GAAAAACGCA TCGAACAGCG CACCGTGCGC
GAAGGACAGC AGTAA
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| Protein sequence | MMRNEVSGAA SGKRYADAKT ALDGVLADGQ TLAVGGFGLC GIPEALIAAL RDSGVAGLTV
ISNNAGVDGF GLGQLLATRQ IRKMISSYVG ENKEFERQYL AGELELEFNP QGTLAERLRA
GGAGIAAFYT ATGYGTIVAE GKETREFDGK HYVLETALHA DVALVKAWRA DTAGNLVFRK
TARNFNPACA MAGRVCIAEV EEIVELGVID PDQVHLPGIY VDRLVLNATP EKRIEQRTVR
EGQQ
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