| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03150 |
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| Symbol | |
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| ID | 6308036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 4647133 |
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| End bp | 4648266 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642641763 |
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| Product | Tfp pilus assembly protein |
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| Protein accession | YP_001915600 |
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| Protein GI | 188578671 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.602648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATCG GCTACTTCCT GAAGCTGATG ACCGAAAAGA ATGCCTCGGA CATGTTCTTG
ACCACCGGCG CGCCGGTGCA CATCAAGATC GAAGGCAAGC TTTACCCGCT CGGCAATACG
GGATTGCCGC CGGGGATGGT CAAGAAAATC GCTTACTCAC TGATGGACGA GGGCCAGGTG
CCGCAGTTCG AGCGCGAACT CGAACTCAAC ATTGCCATCG CCCTGCCCGA CGCCGGCCGC
TTCCGCGTGA ACGCGTTCAA ACAGCGCGGT GAGGTAGGCA TGGTGATCCG TGCCATTCGC
AGCCGGATCC CCAGCATCGA AGAGCTCCAC CTGCCACAGG TGCTCAAGGA CATCATCATG
GCCCCGCGCG GGCTGGTGCT GGTGGTGGGC TCGACCGGCT CGGGCAAGTC GACCTCGCTT
GCCGCGATGA TCGACCACCG CAACAGCACC ACCACCGGGC ACATCCTCAC CATCGAGGAC
CCGATCGAAT ATCTGCACAA GCACAAGATG TCGATCGTGA ACCAGCGCGA GGTGGGCCTG
GATACCCATG CTTTCCAGAG CGCGCTGAAG AATGCGATGC GCGAGGCGCC GGACGTGATC
CTGATCGGCG AGATCCTGGA CGCCGAGACC ATGGAGGCAG CGATCGCCTT CGCCGAAACC
GGCCACCTGT GCCTGGCCAC GCTGCACTCC AACAATGCCG ACCAGACCAT CGAGCGTATC
CTCAATTTCT TCCCGGAAAG CGCGCACAAT AACGTGCTGA TGAACCTGGC GCTCAACCTG
CGCGCGGTCA TCTCCCAGCG TCTGGTCAAG GGCCTGGACG GCCGTCGCCG CCCGGCCACC
GAAGTGCTGC TCAATACGCC GATGATCCGC GACCTGCTAC GCCGCGGCCA GGTGCACGAG
GTCAAGCAGG CGATGGAAGA GTCGCTGGAA GAAGGCATGC AGACCTTCGA CCAGTGCCTG
TTCCGCATGG TGAAGTCGGG CGAAATCGAG CAGGAAGAAG CGCTGCGTGC CGCCGACTCG
CGCGACGGCC TGGCGCTGAA GTTCCGTCTC TCCGAAGACG GCTCCGGCGA GCACGACCCG
TACGCGGATT ACGAAACGCC GGCTGCGCCG AAGATCAGCC ACGGGTTTAT TTAA
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| Protein sequence | MDIGYFLKLM TEKNASDMFL TTGAPVHIKI EGKLYPLGNT GLPPGMVKKI AYSLMDEGQV
PQFERELELN IAIALPDAGR FRVNAFKQRG EVGMVIRAIR SRIPSIEELH LPQVLKDIIM
APRGLVLVVG STGSGKSTSL AAMIDHRNST TTGHILTIED PIEYLHKHKM SIVNQREVGL
DTHAFQSALK NAMREAPDVI LIGEILDAET MEAAIAFAET GHLCLATLHS NNADQTIERI
LNFFPESAHN NVLMNLALNL RAVISQRLVK GLDGRRRPAT EVLLNTPMIR DLLRRGQVHE
VKQAMEESLE EGMQTFDQCL FRMVKSGEIE QEEALRAADS RDGLALKFRL SEDGSGEHDP
YADYETPAAP KISHGFI
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