| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03147 |
|---|
| Symbol | |
|---|
| ID | 6308039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 4650680 |
|---|
| End bp | 4652062 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642641766 |
|---|
| Product | ATP-dependent RNA helicase |
|---|
| Protein accession | YP_001915603 |
|---|
| Protein GI | 188578674 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.457785 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTTG AATCCCTGGG CCTTGCGCCC TTCCTGCTGC GCGCGTTGGC CGAGCAGGGC
TATGAAACCC CCACTGCAAT CCAGCAGCAG GCGATCCCGT TGGTGCTGGC CGGTCACGAC
CTGCTGGCCG GCGCGCAGAC CGGTACCGGC AAGACCGCCG CCTTCGGCCT GCCGCTGCTG
CAGCACCTGG GCACCTCGCC GCAGCCGGTC AACGGCCCGC GCAAGCCGCG CGCGCTGATC
CTGACCCCCA CCCGCGAACT GGCCACCCAG GTGCATGACA GCCTGCGCGG CTACAGCAAG
TACCTGCGCA TTCCCAGCGC AGTGATCTAC GGCGGCGTGG GCATGGGCAA CCAGCTCGAC
ACCCTGCGCC GTGGCGTGGA CCTGCTGATC GCCTGCCCGG GCCGGCTGAT CGATCATATC
GAGCGCCGCA GCGTGGACCT GTCCGGCATC GAAGTGCTGA TCCTGGACGA AGCCGACCGC
ATGCTCGACA TGGGCTTCTT GCCGTCGATC AAGCGCATCC TGACCAAGCT GCCGCGCCAG
GACCGTCAGA CCCTGCTGTT CTCCGCGACC TTCGAAGAGA ACATCAAGCA GCTGGCGCTG
GAGTTCATGC GCAACCCGAT GCAGATCCAG GTCACCCCGA GCAACACCGT GGCCGAGAGC
ATCACCCACC GCGTGCACCC GGTCGATGGC GCGCGCAAGC GCGATCTGCT GCTGCACCTG
CTGGCGCAGG ACAGCCGCGA ACAGACCCTG GTGTTCGCGC GCACCAAGCA CGGCAGCGAC
AAGCTGGCGC TGTTCCTGGA GAAGTCGGGC ATCAAGACCG CGGCCATCCA CGGCAACAAG
AGCCAGGGCC AGCGCATGCG TGCCCTGAGC GACTTCAAGG CCGGCCGCGT GACCGTGCTG
GTCGCCACCG ATATCGCTGC GCGCGGGATC GATATCGACC AGCTGCCGAA GGTCATCAAC
TACGACCTGC CGATGGTGGC CGAGGATTAC GTGCACCGCA TCGGCCGCAC CGGCCGTAAC
GGCTCCACCG GCGAGGCGAT CTCGCTGGTG GCGCAGGACG AAGCCAAGCT GCTGCGTCAG
ATCGTGCGCA TGCTGGGCCG CGACGTGGAA ATCCGCGACG TGCCGGGCTA CGAGCCGCAG
ACGCCGATCC GTTGGGGCAA CAGCGCACCG GGTCGCGCCG AGCAGCCGGG CGGCGATCGC
GCCCCGCGCA AGAGCCACGC CCGTCGCCCG CATGGCGATG CACCGCGTCA GGCGCACGCG
CATGCCGGCC CGAAGAAGCC GGGTGGCCAG CGCAGCGGCG GGCCGCGTCA GGCCAACGCT
GGCCCGGGTG CAGGCCGTCG CGACGACGGT CGCGGTGGTC AGCGTCCGAG CGGTACGCGC
TAA
|
|---|
| Protein sequence | MSFESLGLAP FLLRALAEQG YETPTAIQQQ AIPLVLAGHD LLAGAQTGTG KTAAFGLPLL
QHLGTSPQPV NGPRKPRALI LTPTRELATQ VHDSLRGYSK YLRIPSAVIY GGVGMGNQLD
TLRRGVDLLI ACPGRLIDHI ERRSVDLSGI EVLILDEADR MLDMGFLPSI KRILTKLPRQ
DRQTLLFSAT FEENIKQLAL EFMRNPMQIQ VTPSNTVAES ITHRVHPVDG ARKRDLLLHL
LAQDSREQTL VFARTKHGSD KLALFLEKSG IKTAAIHGNK SQGQRMRALS DFKAGRVTVL
VATDIAARGI DIDQLPKVIN YDLPMVAEDY VHRIGRTGRN GSTGEAISLV AQDEAKLLRQ
IVRMLGRDVE IRDVPGYEPQ TPIRWGNSAP GRAEQPGGDR APRKSHARRP HGDAPRQAHA
HAGPKKPGGQ RSGGPRQANA GPGAGRRDDG RGGQRPSGTR
|
|---|
| |