| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03139 |
|---|
| Symbol | |
|---|
| ID | 6308047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 4656451 |
|---|
| End bp | 4657560 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642641774 |
|---|
| Product | DNA polymerase IV |
|---|
| Protein accession | YP_001915611 |
|---|
| Protein GI | 188578682 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAGGCCT GCGACAGAGA AACCCGCTTG ATGCGCAAGA TCGTGCACGT GGACATGGAT
GCGTTCTACG CGTCCGTGGA GCAACGTGAC GACCCTGGCC TGCGCGGCAA GCCAGTGGTG
GTGGCTTGGC GCGGTGCGCG CTCGGTGGTG TGCGCAGCCT CCTACGAAGC GCGCACCTTC
GGCATTCGCT CGGCGATGCC AGCCGTGCGC GCAGAGCGTC TGTGCCCGAA TGCGATCTTC
GTGCCGCCGG ATTTTGTGCG CTACAAGGCG GTATCGCGGC AAGTGCGCGA GATCTTCCAC
CGGCATACCG ATCTGGTCGA GCCGCTGTCG CTGGACGAGG CCTATCTGGA TGTCACGCAA
GCCAAAACCG GCATGCAGCT GGCCACCGAG ATCGCGCAGC TGATTCGCAC GCAGATTCGC
GAAGAAACCG AGCTCACCGC ATCGGCCGGT ATCGCGCCGA ACAAGTTCCT GGCCAAGATC
GCGTCCGATT GGCGCAAGCC CGATGGTCAG TTCGTGATCG CGCCCAGTCG CATCGACGCA
TTCTTGCTGC CGCTCAAGGT CAATCGCATT CCCGGCGTGG GCAAGGTGAT GGATGGCAAG
CTGGCGGCAC TGGGCATCGT CACCGTGGCC GATCTGCGCC TGCGCCCGTT GGAAGAACTG
CAGGCGCATT TCGGCAGTTT CGGGCAAAGC CTGTACCGCC GCGCGCGCGG CATCGACGAA
CGCCCGGTCG AGCCGGATCA GGACGTGCAG TCGGTTTCCT CGGAAGACAC CTTCAGCGAA
GATCTCGCGC TTGATGCCTT GGATACGCAC ATCCTGCGCC TGGCCGAAAA AACCTGGCTG
GCCACACGCC GCACCGAGCG TATCGGCCGC ACGGTGGTGC TGAAGTTGAA GACCTCCAAT
TTCCGTATCC TGACCCGCTC CTGCACGCCT GAGCAGCCGC CTGTGTCGCA GGAGGCGCTG
GCACAGATCG CGCTGGCACT GACCCGCCGT GTGGAGCTGC CTGCGCAGAC GCGCTATCGC
CTGGTCGGTG TTGGCCTGAG CGGTTTCAGC AATGTCGAAG AAGGCGCTGT GCAGGGGCAG
CTGTTTGGCG AAATTCCCCA GGCCGAGTGA
|
|---|
| Protein sequence | MQACDRETRL MRKIVHVDMD AFYASVEQRD DPGLRGKPVV VAWRGARSVV CAASYEARTF
GIRSAMPAVR AERLCPNAIF VPPDFVRYKA VSRQVREIFH RHTDLVEPLS LDEAYLDVTQ
AKTGMQLATE IAQLIRTQIR EETELTASAG IAPNKFLAKI ASDWRKPDGQ FVIAPSRIDA
FLLPLKVNRI PGVGKVMDGK LAALGIVTVA DLRLRPLEEL QAHFGSFGQS LYRRARGIDE
RPVEPDQDVQ SVSSEDTFSE DLALDALDTH ILRLAEKTWL ATRRTERIGR TVVLKLKTSN
FRILTRSCTP EQPPVSQEAL AQIALALTRR VELPAQTRYR LVGVGLSGFS NVEEGAVQGQ
LFGEIPQAE
|
|---|
| |