| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03125 |
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| Symbol | |
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| ID | 6308063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 4672968 |
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| End bp | 4674146 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642641790 |
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| Product | ABC transporter permease |
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| Protein accession | YP_001915627 |
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| Protein GI | 188578698 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGGTGC TGGCCGGCAT CGGCTGGGCA GTGACGGCCT GGAGCGCCGG CAGCCGCTCG
TTCGACGCCA GCCGGGTGCG CATCGCCACC GTCAGCCAGG GCGACCTGGT GCGCGACATC
GCCGCCGACG GCCGCGTGAT CGCCGCCAAC AGCCCGGTGC TGTACGCCAT CTCGGCCGGC
ACGGTGACGC TGAGCGTGGT CGCCGGCGAC GTGGTCAAGC AGGGCCAGGA ACTGGCGCGT
ATCGACAGCC CCGAGTTGCG CAGCAAGCTG GCGCAGGAAC AGGCCACCCT GGCCGGCCTG
GAAGCCGAAT CCAGCCGCGC CGCCCTGGAT GCCACCCTGG CGCGCGCCAA CGCCAGCAAG
CTCACCGACC AGGCCAAAGT CGACAGACAG GCCGCCGCGC GCGACCTGGA GCGCTATCAG
CGCGGTTACG ACGGCGGCGC CGTGCCGCAG GTGGAACTGG CCAAGGCACA GGACACCTTG
AAGAAGACCG ACATCGACCT GCAGCACGCC CAACGCGATG CGGCGTTGAA GAGCCAGGGC
GCGGATCTGG ATGCGCGCAA CAAGCGCCTG CTGGCGGATC GCCAACGCGC GGTGGTGGCC
GAGGTGCAGC GCCAGGTCGA CGCGCTCACG CTGCTGTCGC CCTTCGATGG TCAGGTCGGC
CAGGTGCAGG CGGTGCAGCA CACCCAAGTC GCCGCGAACG CGCCGATCCT GGGCGTGGTC
GATCTGTCCA AATTCGAAGT CGAGATCAAG GTGCCGGAAA GTTTTGCGCG CGATCTGGCG
ATCGGCATGC CGGCCCAGCT CACCAGCGGC AGCGGCGAAC CGTTTCCGGG CGCCATGTCG
GCCGTGTCGC CGGAAGTGGT CAACGGCGAA GTCACCGCGC GTATCCGCTT CACCGACAAG
CAGCCGCCCG GCCTGCGCCA GAGCCAGCGC ATGAGCGCAC GCGTGGTGAT GGACACGCGC
CGCAACGTGC TCAAGGTCGA GCGCGGCCCG TTCGTCGAGC AATCCGGCGG CAGCTACGCC
TACGTGATGG ATGGCAACAC CGCAGTACGC CGCCCGGTGC GCATTGGCGT CAGCAGCCTG
GGCGACGTGC AGGTGCTTTC CGGGCTGCAG GTTGGCGACC GCGTGGTGGT CTCCGGCGCA
GACAACTTCG GCGACACACC GCGCGTCACC GTCCACTGA
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| Protein sequence | MAVLAGIGWA VTAWSAGSRS FDASRVRIAT VSQGDLVRDI AADGRVIAAN SPVLYAISAG
TVTLSVVAGD VVKQGQELAR IDSPELRSKL AQEQATLAGL EAESSRAALD ATLARANASK
LTDQAKVDRQ AAARDLERYQ RGYDGGAVPQ VELAKAQDTL KKTDIDLQHA QRDAALKSQG
ADLDARNKRL LADRQRAVVA EVQRQVDALT LLSPFDGQVG QVQAVQHTQV AANAPILGVV
DLSKFEVEIK VPESFARDLA IGMPAQLTSG SGEPFPGAMS AVSPEVVNGE VTARIRFTDK
QPPGLRQSQR MSARVVMDTR RNVLKVERGP FVEQSGGSYA YVMDGNTAVR RPVRIGVSSL
GDVQVLSGLQ VGDRVVVSGA DNFGDTPRVT VH
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