| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03122 |
|---|
| Symbol | |
|---|
| ID | 6308066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 4674600 |
|---|
| End bp | 4675568 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642641792 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_001915629 |
|---|
| Protein GI | 188578700 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3464] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCCA AGGTGTTTGA AGCGGCGCTG GGGATCGGCG CGCCGTGGTC GGTAGGCGCG
GTCGAGTTCG ACGAAGCGAC CAAGGTGTTG ACGGTGCCGG TGGACTTCAA GCCGGGCACG
AGGTTCAAGG TATCGGGCCA AAAGGGGCTG CATCCGGTTC ATGACACCGT GGTCAAGACC
TACCGGCACC TGAACTTTTT CCAGCACGAG TGCTACCTGA AGGTTCGCAC GCCGCGTGTG
AAGCTTGGGG ACGGATCGGT TCGCCTGGTC GAGCCGGACT TCGCTGGGCG GTTGTCGGGC
TTCACGCTGT TGTTCGAGGC GCTGGTGCTG ATGTTGTCGC AGCAAATGCC GTTCGCGGCC
GTTGCGCGCA TCGTGGGCGA GTCGGCGTAC CGGTGCATGC AGGTGTGCAA CCGCTATGTC
GAGATGGCCC TGGAGCAGGC CGACTTCAGC GACGTCACGT CGCTGGCCAT CGACGAGACG
TCGCGCGCTC GCGGCCACGA CTATGTGACC TTGGCTGCCG ACGCCCAGGC GCGACGCGTG
ATCTTCGTGA CTGAGGGGCG GGACGCCAAA GCCGTGAAGG CGCTGGCTGC CGATCTGGCA
GCTCATGGCT GCCCTCCCGA ACAGATCACC TCGGTGAGCA TCGACATGTC GCCCGCGTTC
ATCAAGGGCG TAAGCGACCA GTTGCCCAAC GCGCAGATCA CCTTCGACAA GTTCCACGTT
GTCGGACATG CGAACGCGGC CGTGGACAAA ACCAGGCGCA TCGAGCAGCG CACCGAGAAG
TCCCTCAAGG GCATGCGCTG GACGCTGCTC AAGGATGTCT TCAGCCTCAA ACCGACGGCC
GGCGCAGCAT TGCACGGGCT GATCACGGCA CCCAAGCTCA CACGGACGGC CCGCGCGTGG
CTCTACAAGG AGCAGTTGCG CGAGGCGCTT GACCGAGCGA GATGCTCAAG CACTGGTGCG
TCTGCGTGA
|
|---|
| Protein sequence | MTAKVFEAAL GIGAPWSVGA VEFDEATKVL TVPVDFKPGT RFKVSGQKGL HPVHDTVVKT
YRHLNFFQHE CYLKVRTPRV KLGDGSVRLV EPDFAGRLSG FTLLFEALVL MLSQQMPFAA
VARIVGESAY RCMQVCNRYV EMALEQADFS DVTSLAIDET SRARGHDYVT LAADAQARRV
IFVTEGRDAK AVKALAADLA AHGCPPEQIT SVSIDMSPAF IKGVSDQLPN AQITFDKFHV
VGHANAAVDK TRRIEQRTEK SLKGMRWTLL KDVFSLKPTA GAALHGLITA PKLTRTARAW
LYKEQLREAL DRARCSSTGA SA
|
|---|
| |