Gene PXO_03114 details

Gene Information

• Locus tag: PXO_03114
• Symbol: atpC
• ID: 6308076
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: -
• Start bp: 4681462
• End bp: 4681884
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642641802
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_001915639
• Protein GI: 188578710
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 43
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCACTA TCCGTTGCGA CATCGTCAGC GCCGAGAAGG AAATCTTCCA CGGTGAGGCG 
ACGCTGGTCG TGGCCACCGG CGAGCTGGGC GAGTTGGGTA TTGCGCCCAA GCACGCGCCG 
CTGATCACGC GCCTGAAGCC GGGCAAGGTG GTGGTGATCA CCGCCAATGG CGAACATCTG 
GATTTCGCTA TTTCCGGCGG CATCCTGGAA GTGCAGCCGC AGGTGGTGAC CATCCTGGTC 
GACACCGCGG TGCGTGCGCA GGACATCGAA GAAGCGGCCG TGCGCAAGGT CAAGGAAGAG 
GCCGAGCGGC TGCTGGCCAA CCGTGGCAAC ACGGTGGACG TGGCCGAGGC GCAGCGTCGG 
CTGACCGAGG CCACGGTGCA ATTGCAGGCA CTGGAGCGCT TGCGTCGCAA CCTCAAGCAC 
TAA 

 

Protein sequence

MSTIRCDIVS AEKEIFHGEA TLVVATGELG ELGIAPKHAP LITRLKPGKV VVITANGEHL 
DFAISGGILE VQPQVVTILV DTAVRAQDIE EAAVRKVKEE AERLLANRGN TVDVAEAQRR 
LTEATVQLQA LERLRRNLKH