Gene PXO_03109 details

Gene Information

• Locus tag: PXO_03109
• Symbol: atpF
• ID: 6308081
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: -
• Start bp: 4686762
• End bp: 4687232
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 642641807
• Product: F0F1 ATP synthase subunit B
• Protein accession: YP_001915644
• Protein GI: 188578715
• COG category: [C] Energy production and conversion
• COG ID: [COG0711] F0F1-type ATP synthase, subunit b
• TIGRFAM ID: [TIGR01144] ATP synthase, F0 subunit b

Plasmid Coverage information

• Num covering plasmid clones: 43
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATATCA CCCTTACCAT CTTTGCCCAG GCGCTGGCCT TCGCCGGTCT GATCTGGATC 
GTCGCGACCA AAATCTGGCC GCCGCTGCTG CAGGCGATCG AAGAGCGTCA GCAAAAGATC 
GCTGAAGGTC TGGCTGCGGC CGATCGGAGT CAGAAGGATC TGGCGCAGGC GCAGGAAAAG 
GTCAATGAAG TACTGAAGGA CGCCCGCACC AAGGCCAACG AAATCATCGA TCAGGCCCAT 
GCGCGCGCCA ACCAGATCAT CGAAGCGGCC AAGCTGGAGG CAATTGCCGA AGCCAACCGT 
CAGAAAGAAC TGGCGCAGAC CGAAATCGAC GCATCCGCCA CGCGTGCCCG CGAGGAGCTG 
CGCAAGCAGG TCTCGGTGCT GGCCGTCAGC GGTGCAGAAA AGCTGCTCAA GCGCGAAATC 
GACGCCAACG CCCACAAGGC GCTGCTCGAC GAGCTGGCGG CGGAGATTTA A 

 

Protein sequence

MDITLTIFAQ ALAFAGLIWI VATKIWPPLL QAIEERQQKI AEGLAAADRS QKDLAQAQEK 
VNEVLKDART KANEIIDQAH ARANQIIEAA KLEAIAEANR QKELAQTEID ASATRAREEL 
RKQVSVLAVS GAEKLLKREI DANAHKALLD ELAAEI