| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03055 |
|---|
| Symbol | |
|---|
| ID | 6308131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 4734706 |
|---|
| End bp | 4735461 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642641857 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_001915694 |
|---|
| Protein GI | 188578765 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCATGCGA TTGCGGCGAT CTACCGTTTC GAAATGGCGC GCGCGTTCCG CACGCTCACG
CAGTCGATCG CCTCGCCGGT GTTGTCTACC TCGTTGTACT TCGTGGTGTT CGGCGCGGCG
ATCGGTGCGC GCATGGGCGA TATCGACGGC ATCAGCTATG GCGCTTTCAT CATTCCCGGG
CTGGTGATGC TGTCGCTGCT CAACGAAAGC ATTTCCAACG CGTCGTTCGG CATCTACATG
CCGCGCTGGG CCGGCACCAT CTACGAGGTG CAGTCCGCGC CGGTGGCGTG GTGGGAGATC
GTGATCGGCT ACGTGGGGGC GGCGGCGACC AAGTCGGTGA TGCTGGGGCT GTTGATCCTG
CTCACTGCGC GGCTATTCGT GCCGTACCAA ATCGCCCATC CGGTATGGAT GCTGGGCTTT
CTGGTGCTCA CCGCACTGAC CTTCAGCCTG TTCGGTTTCA TCATCGGCAT CTGGGCCGAT
GGTTTCGAAA AATTGCAGGT GATTCCGCTG ATGGTGGTGA CGCCGCTGAC CTTCCTGGGC
GGCAGTTTCT ACTCGATCAA TATGCTGCCG CCGCTGTGGC AGAAGGTCAC GCTGTTCAAC
CCGGTGGTGT ATCTGATCAG CGGCTTCCGC TGGAGTTTCT ACGGCAAGGC CGATGTGCAT
ATCGCGGTGA GCGCCGGCAT GACCTTTCTG TTCCTGGTCG TGTGCCTTGG CGTGGCGGCG
GCGATCTTCC GCAGCGGCTA TTGGCTCAAC GCGTGA
|
|---|
| Protein sequence | MHAIAAIYRF EMARAFRTLT QSIASPVLST SLYFVVFGAA IGARMGDIDG ISYGAFIIPG
LVMLSLLNES ISNASFGIYM PRWAGTIYEV QSAPVAWWEI VIGYVGAAAT KSVMLGLLIL
LTARLFVPYQ IAHPVWMLGF LVLTALTFSL FGFIIGIWAD GFEKLQVIPL MVVTPLTFLG
GSFYSINMLP PLWQKVTLFN PVVYLISGFR WSFYGKADVH IAVSAGMTFL FLVVCLGVAA
AIFRSGYWLN A
|
|---|
| |