| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03054 |
|---|
| Symbol | |
|---|
| ID | 6308132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 4735464 |
|---|
| End bp | 4736408 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642641858 |
|---|
| Product | ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_001915695 |
|---|
| Protein GI | 188578766 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCGA TCGTTGCCAT CCATGGCTTG AGCAAGACCT ACGCCGGCGG TTGCCAGGCG
CTCAAACAGG TGGATGTTGA GATCCAGCGC GGCGAGATCT TCGCGCTGCT CGGCCCTAAC
GGTGCCGGCA AGACGACCTT GATCAGCATC ATTTGCGGGT TGATCAACCC CAGCACCGGC
ACCGTGTTGG CCGATGGGCA CGACATCGTG CGCGACTACC GCGCCGCGCG CGCCAGCATC
GGTTTGGTGC TGCAGGAACT GGCCACCGAC GCGTTCGAAA CGGTATGGGC CACGGTACGA
TTCAGTCGCG GCCTGTTCGG CAAGCCGGCC AATCCGCAGT ATCTGGAAAC CATCCTGCGC
GAGCTCTCCT TATGGGAGAA GCGCAACAAC AAGATTTCCA CGCTGTCCGG TGGCATGAAG
CGGCGCGTGC TGATTGCCAA GGCGCTCGCC CACGAGCCGC GCATTCTGTT TCTGGACGAG
CCCACTGCCG GTGTGGACGT GGAGCTGCGC CACGATATGT GGCAGATGGT GCGGCGGCTG
CGCGAACAGG GCACCACCAT CATTTTGACC ACCCATTACA TCGAAGAGGC CGAAGACATG
GCCGACCGCG TGGGTGTGAT CAACCGCGGC GAACTGGTGC TGGTGGAAGA CAAGCGCACG
CTGATGCGCA AGCTCGGCAA CAAGCAGCTG ACGCTGAGCC TGCAGGCGCC GTTGCAGGCG
TTGCCCGCCG CGGTGGCCGA TCTGCCGCTG GAGTTGGCTG CCGATGGCAA TCGTTTGATC
TACACCTTCG ACACCCAGGC CGAGCAGACC GGCATCGGTG CGTTGCTGCG CCGGCTCAAT
GCGCAGGGCA TCGACTTCAA GGACCTGCAT TCCAGCGAGA GTTCGCTGGA AGAGATCTTC
GTCAACCTGG TGCATGGCGC ACGTCAACAG GAGGTGCGCG CCTGA
|
|---|
| Protein sequence | MTSIVAIHGL SKTYAGGCQA LKQVDVEIQR GEIFALLGPN GAGKTTLISI ICGLINPSTG
TVLADGHDIV RDYRAARASI GLVLQELATD AFETVWATVR FSRGLFGKPA NPQYLETILR
ELSLWEKRNN KISTLSGGMK RRVLIAKALA HEPRILFLDE PTAGVDVELR HDMWQMVRRL
REQGTTIILT THYIEEAEDM ADRVGVINRG ELVLVEDKRT LMRKLGNKQL TLSLQAPLQA
LPAAVADLPL ELAADGNRLI YTFDTQAEQT GIGALLRRLN AQGIDFKDLH SSESSLEEIF
VNLVHGARQQ EVRA
|
|---|
| |