Gene PXO_03050 details

Gene Information

• Locus tag: PXO_03050
• ID: 6308136
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 4739742
• End bp: 4740350
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 642641862
• Product: beta-Ig-H3/fasciclin repeat containing protein
• Protein accession: YP_001915699
• Protein GI: 188578770
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2335] Secreted and surface protein containing fasciclin-like repeats

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTCACGG TTGCCATCCA GGCGATCGCC AACCCAAAGG ATCGATGCCT CATGAAGACT 
TCATTCCAGT CGCTTGCCGC TGCTACCGCC ATTGCCCTGA CCAGCGCCAT GGCCCCCGCC 
TACGCTGCGT CCAATCCAAT GGTTGGCGGC GCGCCGATGC TGGCAACCAA GGACATTGTC 
GATAACGCGG TCAACTCCAA GGACCACACC ACGCTGGTGG CTGCCGTCAA AGCCGCCGGC 
CTGGTCGAGA CGCTGAAGGG GCCGGGCCCG TTCACCGTGT TCGCACCGAC CAATGCGGCG 
TTCTCGGCAC TGCCGGCCGG CACTGTCGAT ACCTTGCTCA AGCCCGAATC CAAGGCGACG 
CTGACCAAGG TGCTGACCTA TCACGTGGTG CCGGGCAAGG TAGATGCTGC ATCGCTGATC 
GCCAAGATCA AGGCCGGCGG CGGTAGCGCT ACGCTGACCA CGGTGCAGGG CGAGCCGCTG 
ACCGCAAAAC TCAATGGCAA GAAGGTCACC ATTACCGACG CCAAGGGCAA TACCGCCAAC 
GTCACCATTG CCGATGTCAT GCAGAGCAAT GGCGTGATCC ACGTGGTGGA CAAGGTGTTG 
ATGCCGTAA 

 

Protein sequence

MFTVAIQAIA NPKDRCLMKT SFQSLAAATA IALTSAMAPA YAASNPMVGG APMLATKDIV 
DNAVNSKDHT TLVAAVKAAG LVETLKGPGP FTVFAPTNAA FSALPAGTVD TLLKPESKAT 
LTKVLTYHVV PGKVDAASLI AKIKAGGGSA TLTTVQGEPL TAKLNGKKVT ITDAKGNTAN 
VTIADVMQSN GVIHVVDKVL MP