| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_03044 |
|---|
| Symbol | |
|---|
| ID | 6308142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 4745191 |
|---|
| End bp | 4745766 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642641868 |
|---|
| Product | tryptophan repressor binding protein |
|---|
| Protein accession | YP_001915705 |
|---|
| Protein GI | 188578776 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0655] Multimeric flavodoxin WrbA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCATGA GCAAGATCGC CATTGTGTAT TTCAGCGGCT ACGGCCACAC CGTCAAGCAG
GCCGAAGCCG TGCATGCAGG CGCAGCCAGC GTTGGCGAGG CCACGCTGTA CCGCATCGAC
CAGGACGGCA ACCTGCCCGA CGACGCCTGG GAGGCCATCA GTGCCGCCGA CGCCATCATC
TACGGCAGCC CCACCTATAT GGGCGGGCCC GCGTGGCAGT TCAAGAAATT TGCCGATGCC
AGCTCCAAGC CGTGGTTTGC GCAGGCATGG AAGGACAAGG TCGCTGCCGG TTTCACCAAC
TCGGCATCGG CGAACGGCGA CAAGGCCACC ACCATCCAAT ATCTGTGGAC CCTGTCGCAG
CAGCATGGCC AGATCTGGGT AGGCACCGGG CTGCCGCCAG CCAACACCAA GGCACACGGG
CCGCAGGACG TGAACTGGAC GGGCGGTTGG GGCGGCGCGC TGGCGATTTC GCCGTCGGAC
GCATCGGCGG ACGAAGCACC GCCTAGTGGC GATCTGGAAA CGGCCAAGCT GTTCGGCAAG
CGGGTGGCCG AATTCGCCGC CAAGCTCAAG CGCTGA
|
|---|
| Protein sequence | MSMSKIAIVY FSGYGHTVKQ AEAVHAGAAS VGEATLYRID QDGNLPDDAW EAISAADAII
YGSPTYMGGP AWQFKKFADA SSKPWFAQAW KDKVAAGFTN SASANGDKAT TIQYLWTLSQ
QHGQIWVGTG LPPANTKAHG PQDVNWTGGW GGALAISPSD ASADEAPPSG DLETAKLFGK
RVAEFAAKLK R
|
|---|
| |