Gene PXO_02985 details

Gene Information

• Locus tag: PXO_02985
• ID: 6308203
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 4803861
• End bp: 4804559
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 642641928
• Product: TPR repeat
• Protein accession: YP_001915765
• Protein GI: 188578836

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGTGTG GCCAGTTCGC CAAGTCCGAT ACGCTAATTT CTGTTGCGGG GACGGTGCTT 
CCTCGGATTG GTTTTCGGCA GGACGAAATA TTTACTCGGT TTGGCATGAT GCTGGATGAT 
TTGTTCACCA GTTATGCTCG TCGAGAGGGT AAGTCGAAAT GGATAAACAA GGAATTGTTT 
TGTGCAAAAA AGCTTGACAT CGTGGACGCA ATGTTTGATT ACAGGGCTAA TTTCATTTTC 
ATCCATCGGC ATGGGTTCGA TGTTGCGTTG TCGGGCTACA ACAGGTTCAT CAAGCGTGAT 
GGGTTCGCAG TTGGATCAAG AAGTGGTTTC TCGCTGGAGA GCTTTCTAGA TGAATGGATC 
AGCAACAACG AGGCGATATT GGATTTCGCG AGGCGTGTAG GCGATCGATG CCTGACTCTG 
CGTTATCAGG ACCTCGTCGA AACCCCTGAT AAGGCTGGAC GCCAAATATT CTCTTTTCTC 
GGAGAAAAGT GGCCAGATGC GGGATTTTCT GGTCTGCGGG ATTTCCGATG GAAAGGGTAC 
ATGGGAGATA ACAAGATCTT CAGCCGAGGC AGTGATCCTG AGGCCGTCGG GGCTCCGTCG 
GAGTGGAAGC GCTGGCCAGC AGGGGTCCTG CACAGTCTGG GGCGAAGGGC CAATGGAACA 
CTGATGCGCC TGGGCTACGA TGTGGTGAAG TCCGTTTAA 

 

Protein sequence

MLCGQFAKSD TLISVAGTVL PRIGFRQDEI FTRFGMMLDD LFTSYARREG KSKWINKELF 
CAKKLDIVDA MFDYRANFIF IHRHGFDVAL SGYNRFIKRD GFAVGSRSGF SLESFLDEWI 
SNNEAILDFA RRVGDRCLTL RYQDLVETPD KAGRQIFSFL GEKWPDAGFS GLRDFRWKGY 
MGDNKIFSRG SDPEAVGAPS EWKRWPAGVL HSLGRRANGT LMRLGYDVVK SV