| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02944 |
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| Symbol | |
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| ID | 6308241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 4851762 |
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| End bp | 4853732 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642641965 |
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| Product | Putative two-component system regulatory protein with GGDEF and EAL domains |
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| Protein accession | YP_001915802 |
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| Protein GI | 188578873 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.308286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCTC GAGATCCGGT TGTTTCCACC ACACTTGACG ACACCGCCAC GCGTAATCGT
CCACTGCGCG CCGAGACCCC GCCGGCCGAT CACTGGCGTC GCTGGGCCGA CGAGGCTGCC
GCGACCTCTG ACGATGTCGC GCCGGTGAGC GCGACCATCA TTCCTGCTCC TGCCGTTGCA
GCTGCGCTAC GGTCGGCTGC CCCCGTGGCC GCGCCGCGCG CGGCAGCCGC GGTCGGCAGG
GCGCGTGCCG CATCGGCATC GGCGCCCACC GCGCCGCCAA CCTCCACCGC TGCGCCACGC
GACGGCGACG ACAACGTCGC GGCCGATGCG CCGTATCGCG TGCTCATCGT CGAAGACGAT
CGCTCGCAGG CCTTGTTCGC GCAAAGCGTG CTGCACGGCG CTGGCATGCA TGCGCAGGTC
GAAATGACCC CCGCCAGCGT GCCGCAGGCG ATCCAGGACT ATCACCCGGA TCTGATCCTG
ATGGACCTGC ACATGCCCGA GCTGGACGGC ATCCGCCTGA CCACGCTGAT CCGTCAGCAG
CCCGGTCAGC AGCTACTGCC GATCGTGTTC CTGACCGGCG ACCCGGACCC GGAGCGGCAG
TTCGAAGTGC TCGACAGCGG CGCCGACGAC TTCCTCACCA AGCCGATCCG CCCGCGCCAT
CTGATCGCCG CGGTGTCCAA CCGCATCCGT CGCGCACGCC AGCAGGCACT GCAGCAGGTC
GGCGAACAGA TCAGCGTGCG TAGCAACCCG GAAACCGGCC TGCCCACGCA CGGCCATGTG
ATGAACCTGC TGGCCGATGC GCTGGAGCGC AAGCAGTCCG GCGGCCTGTT CTTCATCGAG
ATCGCCAGCG CGCTCGACCT GCGCGAACGC TACGGCTACG CCGCCTACGA GCGGTTGATG
ACCCAGGCCG GGCACCGCCT GGCCAGCGCC GCCCAGCCCT ACCCGCTGGC GCGTTTGAAC
GACAACAGCT TCCTGCTGCT GGCCGTGGGC ATGCCCGAAG CCAGCCTGGA ACAGCAGGCG
CTAGAAATCC GTCAACGCTT GTCCGCCAAC GCCTTCCAGG TGCGCGAAGA AGAGTCCGTG
CACGTGCGCT GCGCCGTCGG CGTGGCACCG CTGGGCCTGG GCTTCGACGA CACCGGCAGC
GCGCTGGAAG CGGTCGAACG CACTGCGCTG CAGGCACGCC TGCGCAGCGA CGGCGTGCAG
ACCTATCTGG CACCCAGCCA GGCAGAACAG CAGGAACAAC TGCGGCTGGT CGAAGGCCAA
CTCGAACTGG CGTATCAACC GATCGTGGCC GTGGCCGGCG GCGACACCGC GCAGTACCAG
GTGCTGCTGC GGCTGCCCCA GGCCGACGGT ACCCTGCTGT CGGCGGGCCA GGTCATTCCT
GCCACCGAAG CGGCCGGGCG CATCGCCGAT CTGGACCAGC AGGTCATGGA CCACGCATTG
GGCTTGCTGC ACTTGTACCA GCACGCCAGC CCGCCGCTGC GTCTGTTCGT GTCGCAATCA
CCGCGCACGC TGGCCCGCGA CGCCTTCGCT GATTGGCTGC TCAAGGCACT GCCCGAACGC
GGCGTGGCCG GGCAATCGTT GATCGTGGAT CTACGCCTGG ACGATGCGCT GATCCATGCC
GTCACCGTGC AGCAGTTCTG CGCCAAGTTG ATGCCGGCCG GCGTGCAGTT CTGCCTCAGC
CAATTCGAAC CCGGCGACGA AGCCAACGCG CTGCTGGCCC AGTTGCCGCT GAGCTTCGTG
CGCATGGCCA ACCGCTTCGC CGATGCCCAC GGAAACGCCG CGGTGCGCGA CGAATTGCGC
GACGTGGTCG ACATCGCCCA TCAGCGCGGC CTTTTGATCA TCGGCCAACG CATCGAAGAT
CCTCAGGCAG CGGCTGCGAT GTGGATGAGC GGCGTGGATT TCATCCAGGG CAACCTGGTG
CAGACGGTCG GCAAGGAACT GGACTTCGAT TTCACGAGCG CGGTGCTCTG A
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| Protein sequence | MAARDPVVST TLDDTATRNR PLRAETPPAD HWRRWADEAA ATSDDVAPVS ATIIPAPAVA
AALRSAAPVA APRAAAAVGR ARAASASAPT APPTSTAAPR DGDDNVAADA PYRVLIVEDD
RSQALFAQSV LHGAGMHAQV EMTPASVPQA IQDYHPDLIL MDLHMPELDG IRLTTLIRQQ
PGQQLLPIVF LTGDPDPERQ FEVLDSGADD FLTKPIRPRH LIAAVSNRIR RARQQALQQV
GEQISVRSNP ETGLPTHGHV MNLLADALER KQSGGLFFIE IASALDLRER YGYAAYERLM
TQAGHRLASA AQPYPLARLN DNSFLLLAVG MPEASLEQQA LEIRQRLSAN AFQVREEESV
HVRCAVGVAP LGLGFDDTGS ALEAVERTAL QARLRSDGVQ TYLAPSQAEQ QEQLRLVEGQ
LELAYQPIVA VAGGDTAQYQ VLLRLPQADG TLLSAGQVIP ATEAAGRIAD LDQQVMDHAL
GLLHLYQHAS PPLRLFVSQS PRTLARDAFA DWLLKALPER GVAGQSLIVD LRLDDALIHA
VTVQQFCAKL MPAGVQFCLS QFEPGDEANA LLAQLPLSFV RMANRFADAH GNAAVRDELR
DVVDIAHQRG LLIIGQRIED PQAAAAMWMS GVDFIQGNLV QTVGKELDFD FTSAVL
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