Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02919 |
Symbol | radC |
ID | 6308272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 4882247 |
End bp | 4882924 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642641996 |
Product | DNA repair protein RadC |
Protein accession | YP_001915828 |
Protein GI | 188578899 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACATAC ACGACTGGCC CACCAATGAA CGCCCGCGCG AGAAACTTCT GGCGCGCGGG GCCACTGCCT TGTCCGATGC CGAGCTGCTG GCGATCTTCG TCGGCTCCGG CCTGCGCGGC CAGGACGCAG TACAGACTGC GCGCGATCTG CTGCACCGGC ACGGGCCGCT GCGCCCGCTG CTGGACCGCC CAGCCAAAGC GCTGGAGCGC CTGCCGGGGC TGGGCCCGGC CTCGGCCTGC AAGCTCGCGG CGGCGCTGGA ATTGGCACAT CGCCACCTGA TGAGTGCGCT GGAGCGCGGA GAGGCGCTCA GCGACCCGCC CAGCGTAGGC CGCTACTTCT CGCAGCGGCT GCGCGCGCGG GCCTACGAAG TGTTCGCGGT GCTGTTCCTG GACAACCGCC ATCGCGCCAT CGCGTTCGAA GAATTGTTCA CCGGCACCAT CGATGGCGCC GACATCCATC CACGCGAAGT GGTGCGGCGG GCGCTACTGC ACAATGCGGC AGCGGTGATC GTCGGCCACA ACCACCCATC CGGCAATCCG GAGCCCTCCA AGGCCGACCG CGCAGTCACC AAACGCCTGC TGGACAGCCT GGAACTGGTC GACATCCGCC TGCTGGACCA TTTCGTCATC GGCGATGGCC GGCCGGTGTC GCTAGCCGAG CGTGGCTGGC TGGAATGA
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Protein sequence | MHIHDWPTNE RPREKLLARG ATALSDAELL AIFVGSGLRG QDAVQTARDL LHRHGPLRPL LDRPAKALER LPGLGPASAC KLAAALELAH RHLMSALERG EALSDPPSVG RYFSQRLRAR AYEVFAVLFL DNRHRAIAFE ELFTGTIDGA DIHPREVVRR ALLHNAAAVI VGHNHPSGNP EPSKADRAVT KRLLDSLELV DIRLLDHFVI GDGRPVSLAE RGWLE
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