Gene PXO_02919 details

Gene Information

• Locus tag: PXO_02919
• Symbol: radC
• ID: 6308272
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 4882247
• End bp: 4882924
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 642641996
• Product: DNA repair protein RadC
• Protein accession: YP_001915828
• Protein GI: 188578899
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2003] DNA repair proteins
• TIGRFAM ID: [TIGR00608] DNA repair protein radc

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACATAC ACGACTGGCC CACCAATGAA CGCCCGCGCG AGAAACTTCT GGCGCGCGGG 
GCCACTGCCT TGTCCGATGC CGAGCTGCTG GCGATCTTCG TCGGCTCCGG CCTGCGCGGC 
CAGGACGCAG TACAGACTGC GCGCGATCTG CTGCACCGGC ACGGGCCGCT GCGCCCGCTG 
CTGGACCGCC CAGCCAAAGC GCTGGAGCGC CTGCCGGGGC TGGGCCCGGC CTCGGCCTGC 
AAGCTCGCGG CGGCGCTGGA ATTGGCACAT CGCCACCTGA TGAGTGCGCT GGAGCGCGGA 
GAGGCGCTCA GCGACCCGCC CAGCGTAGGC CGCTACTTCT CGCAGCGGCT GCGCGCGCGG 
GCCTACGAAG TGTTCGCGGT GCTGTTCCTG GACAACCGCC ATCGCGCCAT CGCGTTCGAA 
GAATTGTTCA CCGGCACCAT CGATGGCGCC GACATCCATC CACGCGAAGT GGTGCGGCGG 
GCGCTACTGC ACAATGCGGC AGCGGTGATC GTCGGCCACA ACCACCCATC CGGCAATCCG 
GAGCCCTCCA AGGCCGACCG CGCAGTCACC AAACGCCTGC TGGACAGCCT GGAACTGGTC 
GACATCCGCC TGCTGGACCA TTTCGTCATC GGCGATGGCC GGCCGGTGTC GCTAGCCGAG 
CGTGGCTGGC TGGAATGA 

 

Protein sequence

MHIHDWPTNE RPREKLLARG ATALSDAELL AIFVGSGLRG QDAVQTARDL LHRHGPLRPL 
LDRPAKALER LPGLGPASAC KLAAALELAH RHLMSALERG EALSDPPSVG RYFSQRLRAR 
AYEVFAVLFL DNRHRAIAFE ELFTGTIDGA DIHPREVVRR ALLHNAAAVI VGHNHPSGNP 
EPSKADRAVT KRLLDSLELV DIRLLDHFVI GDGRPVSLAE RGWLE