| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02909 |
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| Symbol | pcaD |
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| ID | 6308283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 4891816 |
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| End bp | 4892583 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642642007 |
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| Product | 3-oxoadipate enol-lactonase |
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| Protein accession | YP_001915839 |
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| Protein GI | 188578910 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR02427] 3-oxoadipate enol-lactonase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCCACGC ATCGCCTGCA TTACCGCCTG GACGGCACCG AAGGGCGCCC CTGGCTGACC
TTCTGCAATT CGCTTGGCAC CGACCTGCAT CTGTGGGACG TGCAGATCGA AGCCTTCGCC
CCGCATTACC GCATCCTGCG CTATGACCGC CGTGGCCATG GCGATTCGGA GACGCCGCCG
GGTCCGTACA GCGTCGCCGA TCTGGGCCAA GACGTGCTGG CGCTATGGGA CGCGTTGGAG
ATCGCGCAAA GCGATTTCTG CGGCCTCTCG ATCGGCGGCC TGACTGGCCA ATGGCTGGGC
CTGCATGTAC CGCACCGCTT GCGCCGACTG GTGGTATGCG CCACCGCGAA GAAGATTGGC
AGCGCCGCCA CCTGGGAAAG CCGCATCGAA CAGGTGCGCA GCGAAGGCCT GCCGGTGCTG
ATCGATGCCA CGTTGCAGCG CTGGTTTACG CCGGAATTCG CCATCAGCCA CGCGCAGCGC
CTGGACATGA TCGCCGCCGC CTTCGTGTCC ACCTCGCCGG CCGGCTACAT CGCCTGTTGC
CAGGCGCTGG CGGACGCGGA TTTCCGCGGC GCACTGGACG GGCTGAGCGT TCCGCTGCTC
GCGCTGGCCG GCGACGATGA CCCGGTGTGC CCGCCATCTG ATTTGCGCGA GATCGCCTAT
GCCGCGCCGG ACGGTCATTA CGGCCAGGTA CCCGGCCGCC ACATCTGCAA CCTGGAATCG
CCGGCCGCGT TCAACGACGC GGTGCTCGGC TTTCTTCAGG CCGACTGA
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| Protein sequence | MPTHRLHYRL DGTEGRPWLT FCNSLGTDLH LWDVQIEAFA PHYRILRYDR RGHGDSETPP
GPYSVADLGQ DVLALWDALE IAQSDFCGLS IGGLTGQWLG LHVPHRLRRL VVCATAKKIG
SAATWESRIE QVRSEGLPVL IDATLQRWFT PEFAISHAQR LDMIAAAFVS TSPAGYIACC
QALADADFRG ALDGLSVPLL ALAGDDDPVC PPSDLREIAY AAPDGHYGQV PGRHICNLES
PAAFNDAVLG FLQAD
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