Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02887 |
Symbol | |
ID | 6308305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 4917801 |
End bp | 4919600 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642642028 |
Product | glycosyl hydrolase, family 15 |
Protein accession | YP_001915860 |
Protein GI | 188578931 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTGC GTATCGAGGA CCATGCCATG CTGGGCAACT GCCACAGCGC GGCCCTGGTC GATCACCGCG GCACCATCGA TTGGCTGTGT CTGCCACGCT TCGATTCCGA CGCCGTCTTC GCCTCGTTGT TGGGCGCTGA CCAACATGGG CAATGGGCAT TGTCGCCGGC TGCCGACTTC CGCACCGAGC GCGCCTACGA AGACGACAGT CTGGTGCTGT GCACGCGCAT GATCACCGAC AGCGGCACGG TGGAACTGGT CGACTTCATG GTGGCCAGCG AAAACACCGA AGTCCACCAG CACCTGGTGC GTCTCGTGCG CTGCGTACAG GGCAGCGTGC CGATGCACAT GCGCCTCACC TTCCGCTTCA ACTACGGCCG CACGGTGCCA TGGGTCACAC GTATCGTCGA TGGCATCCGC GCCATCGCCG GCCCCGATCA ACTGGCACTG CGTTCGCCGC AAACGCTGCG CGGCCAAGAC ATGGGCACCG AAGCCGACTT CACCCTGCGC GAAGGCGGAA GCACCTGGTT TCTGCTCAGC CACGGCGCCT CGCATCTGGA GACGCCGCCC CTGATCGATG CCGAACAGGC ATTGCAACGC ACCACCGCGT TCTGGCATGG CTGGGCGCGC CGCTGCACCG ATGTCGGGCC GTGGACCGAG CAGGTACGCC GCTCTTTGGT CGTTTTGAAG GGACTGAGTT ATCTGCCCAC CGGCGGCATT GTCGCCGCGC CCACTGCCGC GTTGCCGGAG CATCTGGGCG GCACGCGTAA TTGGGATTAC CGCTACTGCT GGCTGCGCGA TTCGGTGTTC ACCCTGATTG CGTTGCTGCA GGCCGGGTAT CGCGATGAAG CCGCTGCGTT TCGCGATTGG GTCCACCGCA CCATTGCCGG TTCGCCGGAT CAATTGCAGG CGTTGTACGG CATCGCCGGC GAACGCCGCT TGCAGGAATG GGAAGCGTCC TGGTTGCCCG GTTATGAAGA TTCCGGCCCG GTACGCATCG GTAATGGCGC GGTGGATCAG TTTCAGCTCG ATGTCTATGG GGAGTTGATC GGCGCCTTTC ATTACGCAAG CGAAAAAGGC GTCGGCCCGC CGTCGGACGA CGATGGTTCG TCCGCATCGC TGCTGGAAAA CATCCTCGAT ACACTGGAAA CGCTGTGGCG CGAACCCGAT GAAGGCATCT GGGAAATCCG CGACGAGCGC CGCCACTTCG TCCATTCCAA GGTGATGGCC TGGCTGGCGT TCGACTGCGG CGCGCGTGAC GGCATCACCA ATGCAGACGC TGAAAAACGC GCGCACTGGG GCCGCATTGC CGACCAAATT CGAGCCGAAG TCCTGGAAAA AGGCGTACAT CCGGACGGCC ATTTCGTGCA GAGCTATGGC TCGGATCGGC TGGATGCCTC GCTGCTGCTG ATCCCCATCG TGGGTTTTCT GCCGCCGGAC GATCCGCGCA TCGCTGCGAC CGCCGACGCG ATCGCACGCG ATCTCACCAT CGATGGATTG ATCGAGCGCT ATCGTGCCGA CGACAGCGCC GACGGCCTGC CGGCCGGCGA GGGCACCTTC CTGGCCTGCA GTTTCTGGCT GGTGGAAAAC TATGCCTTGA TCGGCCGCAC CGACCAGGCG CGTGCGCTGC TCGAACGTCT GCTCGGGCTC TGCAACGACG TTGGTCTGCT CGCCGAAGAA TACGACCCGC GCAGCAAACG CATGCTCGGC AACTTCCCGC AAGGGTATTC CCACGTGGCC CTGGTCAATG CGGCATTGCG CCTGCACGGA CGCATGGGCG AAAAGGAAAC GCATCCATGA
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Protein sequence | MSVRIEDHAM LGNCHSAALV DHRGTIDWLC LPRFDSDAVF ASLLGADQHG QWALSPAADF RTERAYEDDS LVLCTRMITD SGTVELVDFM VASENTEVHQ HLVRLVRCVQ GSVPMHMRLT FRFNYGRTVP WVTRIVDGIR AIAGPDQLAL RSPQTLRGQD MGTEADFTLR EGGSTWFLLS HGASHLETPP LIDAEQALQR TTAFWHGWAR RCTDVGPWTE QVRRSLVVLK GLSYLPTGGI VAAPTAALPE HLGGTRNWDY RYCWLRDSVF TLIALLQAGY RDEAAAFRDW VHRTIAGSPD QLQALYGIAG ERRLQEWEAS WLPGYEDSGP VRIGNGAVDQ FQLDVYGELI GAFHYASEKG VGPPSDDDGS SASLLENILD TLETLWREPD EGIWEIRDER RHFVHSKVMA WLAFDCGARD GITNADAEKR AHWGRIADQI RAEVLEKGVH PDGHFVQSYG SDRLDASLLL IPIVGFLPPD DPRIAATADA IARDLTIDGL IERYRADDSA DGLPAGEGTF LACSFWLVEN YALIGRTDQA RALLERLLGL CNDVGLLAEE YDPRSKRMLG NFPQGYSHVA LVNAALRLHG RMGEKETHP
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