| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02883 |
|---|
| Symbol | |
|---|
| ID | 6308309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 4923812 |
|---|
| End bp | 4925011 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642642032 |
|---|
| Product | 3-oxoacyl-(acyl carrier protein) synthase I |
|---|
| Protein accession | YP_001915864 |
|---|
| Protein GI | 188578935 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCCGG TTGCCGTCAC CGCGTTCACT TCCACCACTG CGCTCGGCGC CGGGCTTGCC
ACCCAGGCCG CCGCGTTAAC GGCCCGCCGT AGCGGCCTGC GGCGCAATGA TTTCGGTCCG
CAACCGCTGC TGCCCTGCTG GGTTGGCCGC GTCGATGGCG TTGAAGACGT CGTGCTGCCC
GATGCCCTGC AAGACTGGGA CTGCCGCAAC AACCGCCTGG CCTGGCTTGC TCTGCAGCAG
GACGGCATGG CGCAGGCCGT GCAGGCCGCC GCACAGCGCT ACGGCGCCGA GCGGGTGGCG
GTGATCATCG GCACCTCCAC CTCCAGCATC GGTGCCAGCG AAGAAGCGTA TACGCGGCTG
GTCGACGACG CCGACGGCGC GCGTTTCCCC GAGGATCTGA ATCGCCCGAT CGTGCACACC
CCGCATTCGC TGGGCGACTT CGTACAGCAC GCCACCGGCT TGCGAGGCCC GTGTGTCACC
GTGGCCACGG CGTGTTCGTC CAGCGCCAAG GTGTTCGCCC AGGCGGCGCG GCTGATGGAT
GCCAGGGTCA TCGACGCCGC GCTGGTCGGC GGCGTGGATA CGTTGTGCGG CAGCGTGCTG
TTCGGCTTCA ACGCGCTGCA GGTGGTGGCA CCGGAGATGT GCCAGCCATT CGATGCGCGC
CGGGTCGGCC TGAGCCTGGG CGAGGCGGGC GGCTTTGCGC TGCTAGAACG CCCGGCCGCC
GCACCGGATG CGGCGCTGTG GCTGTGCGGC TACGGCGAAT CCAGCGATGC GCACCATATG
TCGGCGCCGC ATCCGCAAGG TTTGGGCGCG CAGTTGGCGA TGCGCGGTGC GCTCGAGCGC
GGCGGTCTGG AGCCGGGTGC GGTGGGCTAT CTGAATCTGC ACGGTACCGC CACGCCGGCC
AACGACAGCG TGGAAGCTGC TGCCGTCGCC GCAATCTTCC CCGGCAGCTT GCATGCCAGT
TCGACCAAGG CCTGGACCGG CCACACCCTC GGCGCGGCAG GCATCGTCGA ATCGGTGATC
GCCCTGCTCG CGCTGCGCGA CGACGTGCTG CCCGGCACGC TCAACAGCGA GGTGCCCGAC
CCGGCCTGCG GCCCGCAGAT CCGCTTCGAC AACGCCCATG CCCGGATCGA CTACGCCATG
AACAACTCTT TCGGCTTTGG CGGCAACAAC TGTTCGCTGC TGTTCGGGCG GGCGCGCTGA
|
|---|
| Protein sequence | MAPVAVTAFT STTALGAGLA TQAAALTARR SGLRRNDFGP QPLLPCWVGR VDGVEDVVLP
DALQDWDCRN NRLAWLALQQ DGMAQAVQAA AQRYGAERVA VIIGTSTSSI GASEEAYTRL
VDDADGARFP EDLNRPIVHT PHSLGDFVQH ATGLRGPCVT VATACSSSAK VFAQAARLMD
ARVIDAALVG GVDTLCGSVL FGFNALQVVA PEMCQPFDAR RVGLSLGEAG GFALLERPAA
APDAALWLCG YGESSDAHHM SAPHPQGLGA QLAMRGALER GGLEPGAVGY LNLHGTATPA
NDSVEAAAVA AIFPGSLHAS STKAWTGHTL GAAGIVESVI ALLALRDDVL PGTLNSEVPD
PACGPQIRFD NAHARIDYAM NNSFGFGGNN CSLLFGRAR
|
|---|
| |