Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02746 |
Symbol | |
ID | 6308451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 5058324 |
End bp | 5060009 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642642170 |
Product | polyvinylalcohol dehydrogenase |
Protein accession | YP_001916000 |
Protein GI | 188579071 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4993] Glucose dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTTTCG CGCAGTCTGG CGCCACCACC GCGCAACAGC CGGTATCGTC CCTGGATACC GAGGCATTCG CACGCTCCGG CCAGGTCTGG CGCAGCTTCG GTCAAGACCT TCCCTTCGCC AGCCCCAGCA ACTGGACCAC CGCCGGTGGC GGCTACTTGA ACTCGCGCTT TGCACCGGGC GAGTGGAAGA TCAATCGCAC CACCGCCAAG ACGCTCAAGC CGGCGTGGAC GCTGACCACC ACCGGCGATA TCTCGGCCAC GCCCAGCGTC GAAGGCGGCA CGCTGTATGT GCCCGACTGG GGCGGCACGC TGTATAGCGT GGACACGCAA ACCGGCAAGC CGAACTGGCA GGCCAAACTG TCCGATTACA CCGGCAACGC CAACTCGGTG ACGCGCAACA CGCCGGCCAT CAGCGCCAAG AGCATCATCG TTGGCGACCA GGTCGCCGGC ACCTTGCTGG CGCTGGACAA GAAGACCGGC AAGCTGCTGT GGAAGACCAC GGTGGAAGCC AACCCGCAGG CGCGCATCAC CTCCTCGCCG GTCATCTACG GTAACCGCAT CTACGTCGGC GTTTCTTCCG GCGACTGGGG CAACCTGGCG GCCAACCACA CCTTCAGTTT CCGCGGCAGC GTGGTGGCGG TGGATCTGAA CACCGGCAAG AAGGTGTGGC AGTTCTATAA CGTGCCCGAG GGCTACACCG GCGCATCGGT GTGGGGCCAG GTGGCCATCG ACCCGATCAA CCGTCGCCTG TATTTCGGCA CTGGCAACAA CTACAACATT CCGCAGGACG TTGGTAACTG CATTTCAAAC GAGCGCTCTT ACCGCGGCAG CGAAATCACC GTGCAGGATG AGCTCAACTG CATGGCGCCG GACAACTACG TCGACTCGGT GATTTCGTTG AATCTGGATA CCGGCAAATT GGTTTGGGCC AACCGTGCAC AGGGGTACGA TGCGTGGAAC CTGTCCTGCC TCGTGGCACC GACCAACGGT CTGTGCCCCA ACACGCAGGC AACCAACCTG ACCGGCCCGG ATTACGACTT TGGCGGTGCT GGCGTGCAAC TTTTTGCCGT GCCGGGCAAC GGCAGGTTGC AGCAGTTGGT CGGTGCTGGT CAGAAGAGCG GCATCTACTG GGCCTTCGAC GCCAAGACCG GCGCCAAGGT GTGGTCGACC CAGGTCGGCC CCGGCGGCAC CACCGGTGGC GTGGAATGGG GTACCGCGTT CGACCCGTAC AAGTCGCAGG TCTACGTGGC CATCAACAAC AACGCCAACA CCACCTACAC ATTGGGGCCG GCAAACGTGC AGACCCATAA CGGTGGTTCG TGGGCCGCGC TGGACGCGGC AACCGGCAAG ATCAAATGGC AGGTCAAGGT GCCTGGCATC AACCCGGTGA ATCCGACCGT GCCGGCGGGC GGCCAGGGCT CGCTGACGGC CTCGCCGAAC CTGCTGTATG CCGGCTCGAT GGCCGGCAAT ATGGTCGCAC TGGACGCCGA CACCGGCGCC ACCGTGTGGA ACTACGACGC TAGCGGCTCG GTGGTCAGTT CCCCGGCCAT CGCAAACGGC GCACTGTACT GGGGCGACGG CTACGGCCGC TTCAACTTCG GCACCGCCGC CACCGGCAAC CAGCTGATCA AGTTCGTGCC GGATAACACA GCAGCGAAGT CAGCAGGATC CGCAGGACGG CAGTGA
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Protein sequence | MAFAQSGATT AQQPVSSLDT EAFARSGQVW RSFGQDLPFA SPSNWTTAGG GYLNSRFAPG EWKINRTTAK TLKPAWTLTT TGDISATPSV EGGTLYVPDW GGTLYSVDTQ TGKPNWQAKL SDYTGNANSV TRNTPAISAK SIIVGDQVAG TLLALDKKTG KLLWKTTVEA NPQARITSSP VIYGNRIYVG VSSGDWGNLA ANHTFSFRGS VVAVDLNTGK KVWQFYNVPE GYTGASVWGQ VAIDPINRRL YFGTGNNYNI PQDVGNCISN ERSYRGSEIT VQDELNCMAP DNYVDSVISL NLDTGKLVWA NRAQGYDAWN LSCLVAPTNG LCPNTQATNL TGPDYDFGGA GVQLFAVPGN GRLQQLVGAG QKSGIYWAFD AKTGAKVWST QVGPGGTTGG VEWGTAFDPY KSQVYVAINN NANTTYTLGP ANVQTHNGGS WAALDAATGK IKWQVKVPGI NPVNPTVPAG GQGSLTASPN LLYAGSMAGN MVALDADTGA TVWNYDASGS VVSSPAIANG ALYWGDGYGR FNFGTAATGN QLIKFVPDNT AAKSAGSAGR Q
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