| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02721 |
|---|
| Symbol | acnA |
|---|
| ID | 6307910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 4511637 |
|---|
| End bp | 4514228 |
|---|
| Gene Length | 2592 bp |
|---|
| Protein Length | 863 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642641639 |
|---|
| Product | aconitate hydratase |
|---|
| Protein accession | YP_001915477 |
|---|
| Protein GI | 188578548 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1048] Aconitase A |
|---|
| TIGRFAM ID | [TIGR01341] aconitate hydratase 1
[TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGCC AGTACCGCAA GCCCTTGCCG GGCACCTCGT TGGATTACTT CGATGCACGC
GCCGCCATCG ACGCGCTGCA ACCTGGTGCG TATGCAGGCT TGCCGTACAC CGCGCGCGTG
CATGCCGAAA ACCTGGTGCG GCGCGCAGAA CCGCAGCTGC TGGAGGCGTA CCTGCGCCAG
CTGATCGAGC GCAAGCGCGA CCTGGATTTC CCATGGTTTC CGGCGCGCGT GGTCTGCCAC
GACATCCTCG GCCAGACCGC ATTGGTGGAT CTTGCAGGTT TGCGCGATGC CATTGCCGAG
CAGGGCGGCG ACCCGGCACA GGTGAATCCT GTAGTGCCGG TGCAGTTGAT TGTGGATCAC
TCGCTGGCGG TGGAATACGC CGGCTTCGAC AAGCAGGCCT TCGCCAAGAA CCGCAGCGTG
GAAGACCGTC GCAATGCCGA TCGCTTCCAC TTCATCGAGT GGACCAAGCG TGCGTTCGAG
AACATGGAGG TGATTCCGCC GGGCAACGGC ATCATGCATC AGATCAATCT GGAGAAGATG
TCCCCGGTGA TCTATACGCT GGACGGCGTG GCATTTCCGG ACACCTGCGT GGGTACCGAC
AGCCATACGC CGCATGTGGA TGCGCTGGGT GTCATCGCGG TAGGCGTCGG TGGATTGGAG
GCGGAGAACG TGATGCTGGG GCGCGCCTCG TGGATGCGCT TGCCGGACAT CATCGGCGTG
GAATTGACTG GCCGGCCGGC GCCGGGCATC ACTGCCACCG ACATCGTGTT GGCACTGACC
GAATTCCTGC GCGCGCAACG CGTAGTCGGT GCGTATCTCG AGTTCTACGG CGATGGCGCG
CGTGCGCTGA CCATTGGCGA CCGTGCGACC ATTTCCAACA TGACGCCGGA ATTCGGTGCG
ACGGCGGCGA TGTTCTACAT CGACCAGCAA ACCATCGATT ACCTGCGCTT GACCGGTCGC
GAAGACGCGC AGGTCGCGTT GGTGGAGACC TATGCGCGGC ACACCGGCCT ATGGGCAGAC
GACATGGCCA CCGCGCACTA CGAGCGCGTG CTGCAGTTCG ATCTGGCGAG CGTGGTGCGC
AACATGGCCG GGCCGTCCAA TCCGCATAAA CGCGTGGCGA CCACCGAGCT GGCGCAGCGC
GGCATTGCCG GTACGTGGGA AGCCGTCCCG GGACAGATGC CCGATGGCGC CGTGATCATT
GCGGCGATCA CCTCGTGCAC CAACACCTCA AACCCGCGCA ACGTCATTGC CGCCGGCTTG
CTGGCGCGCA ATGCCAATGC ACGTGGCTTG ACCCGCAAAC CGTGGGTGAA GAGTTCGCTG
GCGCCGGGCT CCAAGGCAGT GCAGCTGTAC CTGGAAGAAG CCGGCTTGTT GAGCGAGCTG
GAACAGCTGG GCTTCGGCAT CGTGGCGTTC GCGTGCACCA CCTGTAACGG CATGAGCGGG
GCGCTGGATC CGGTGATCCA ACAGCAGATC ATCGATCGCG ATCTGTATGC CACAGCAGTG
CTCTCGGGCA ACCGCAATTT CGATGGACGC ATCCACCCAT ATGCCAAGCA GGCATTTCTC
GCCTCGCCGC CGTTGGTGAT TGCCTATGCA ATCGCCGGCA CGGTGCGCTT CGATATCGAA
AAGGATGTGC TGGGCATCGA TGCCGCGGGC GTGCCGGTCA CGTTGAAGGA TCTATGGCCG
AGCGATGCCG AGATCGATGC GGTGGTGGCG CGCAGCGTCA GGCCGGAACA CTTCCGCAGC
GTGTACGACC CGATGTTCAA GCGCAGCGTG GGACAGGGGA CCAACGTGAA CCCCTTGTAC
GACTGGCGCC CGGCCAGCAC GTATATTCGG CGCCCGCCGT ATTGGGAAGG CGCGTTGGCG
GGGACGCGCA CGCTGCGCGG CATGCGCCCG TTGGCCGTGC TGGGCGACAA CATCACCACC
GACCATGTGT CGCCGTCGAA CGCGATCATG GCCGGCAGTG CGGCCGGCGA ATATCTGGCG
CACATGGGCG TGCCGGAAGA AGACTTCAAT TCTTACGCCA CCCACCGCGG CGACCACCTC
ACCGCGCAGC GTGCGACGTT TGCCAACCCC ACGTTGATCA ACGAAATGGT GGTGGTCGAC
GGGCAGGTCA ACGCTGGCTC GCTGGCGCGT CTGGAGCCAG AAGGCCAGGT GCTGCGCATG
TGGGAGGCGA TCGAAACCTA CATGACGCGC AAGCAGCCGT TGATCATCAT TGCCGGCGCC
GATTACGGTC AGGGCTCGTC GCGCGACTGG GCGGCCAAGG GCGTGCGGCT GGCGGGTGTT
GAAGTGATCG TGGCCGAAGG CTTCGAGCGG ATTCATCGCA CCAACTTGAT CGGCATGGGC
GTATTGCCGC TGGAGTTCAA GCCGGGCACC GATCGCAAGA CCCTGGGTAT CGATGGCAGC
GAAACCTTCG ATGTGGTGGG TGAGCGTAGG CCTGGTGCCA CGCTGACGTT GTCGATCCAT
CGGCGTGATG GCGATCAGCT GCAAGTGCCG GTGACCTGCC GGCTGGATAC TGCCGAAGAA
GTGTCGATTT ACGAAGCAGG CGGCGTGTTG CAGCGGTTTG CGCAGGATTT TCTGGAAGCC
TCCGCTGCCT GA
|
|---|
| Protein sequence | MNSQYRKPLP GTSLDYFDAR AAIDALQPGA YAGLPYTARV HAENLVRRAE PQLLEAYLRQ
LIERKRDLDF PWFPARVVCH DILGQTALVD LAGLRDAIAE QGGDPAQVNP VVPVQLIVDH
SLAVEYAGFD KQAFAKNRSV EDRRNADRFH FIEWTKRAFE NMEVIPPGNG IMHQINLEKM
SPVIYTLDGV AFPDTCVGTD SHTPHVDALG VIAVGVGGLE AENVMLGRAS WMRLPDIIGV
ELTGRPAPGI TATDIVLALT EFLRAQRVVG AYLEFYGDGA RALTIGDRAT ISNMTPEFGA
TAAMFYIDQQ TIDYLRLTGR EDAQVALVET YARHTGLWAD DMATAHYERV LQFDLASVVR
NMAGPSNPHK RVATTELAQR GIAGTWEAVP GQMPDGAVII AAITSCTNTS NPRNVIAAGL
LARNANARGL TRKPWVKSSL APGSKAVQLY LEEAGLLSEL EQLGFGIVAF ACTTCNGMSG
ALDPVIQQQI IDRDLYATAV LSGNRNFDGR IHPYAKQAFL ASPPLVIAYA IAGTVRFDIE
KDVLGIDAAG VPVTLKDLWP SDAEIDAVVA RSVRPEHFRS VYDPMFKRSV GQGTNVNPLY
DWRPASTYIR RPPYWEGALA GTRTLRGMRP LAVLGDNITT DHVSPSNAIM AGSAAGEYLA
HMGVPEEDFN SYATHRGDHL TAQRATFANP TLINEMVVVD GQVNAGSLAR LEPEGQVLRM
WEAIETYMTR KQPLIIIAGA DYGQGSSRDW AAKGVRLAGV EVIVAEGFER IHRTNLIGMG
VLPLEFKPGT DRKTLGIDGS ETFDVVGERR PGATLTLSIH RRDGDQLQVP VTCRLDTAEE
VSIYEAGGVL QRFAQDFLEA SAA
|
|---|
| |