| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02714 |
|---|
| Symbol | |
|---|
| ID | 6307918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 4521031 |
|---|
| End bp | 4521990 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642641647 |
|---|
| Product | DNA polymerase III subunit delta' |
|---|
| Protein accession | YP_001915484 |
|---|
| Protein GI | 188578555 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
|---|
| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.577208 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCG CATTTGCACC CTGGCAGCAG CGTGCCTTCG ACCAGACCGT GGCCGCGCTG
GATGCGGGAC GGCTCGGGCA TGGGCTGCTG ATCTGCGGCC CGGAAGGTCT GGGCAAGCGT
GCCGTCGCCC TGGCCCTGGC CGAGCACGTG CTGGCCAGCT CGCCGGACCC GGCACTGGCG
CAGCGCACGC GCCAGTTGAT CGCCGCCGGT ACCCATCCGG ACCTGCAGCT GATCTCGTTC
GTTCCCAATC GCACCGGCGA CAAGCTGCGC ACGGAAATCG TCATCGAACA GGTGCGCGAG
ATTTCGCAGA AGCTCGCGCT CACGCCGCAC GACGGCATTG CCCAGGTGGT GATCGTCGAC
CCGGCCGATG CGATCAATCG CTCGGCCTGC AACGCCTTGC TCAAGACCCT GGAAGAACCC
TCGCCCGGCC GTTACCTGTG GTTGATCAGT GCGCAGCCGG CGCGGCTGCC GGCGACCATC
CGCAGCCGCT GTCAGCGCCT GGAATTCAAG CTGCCGCCCG CGCACGAAGC CCTTGCCTGG
CTGCTGTCGC AAGGCGTGAG CGAGCGCGCC GCGCAGGAAG CGCTGGATGC CGCGCGCGGC
CATCCCGGCC TGGCGGCGCA GTGGTTGCGC GAAGACGGCC TGGCCGTGCG GCGTGCGGTT
GCGCAGGATC TGGAGCAGAT TGCCAGTGGC CGCGCCGGCG CAGTCGATGT CGCGCAGCGC
TGGACCAACG ACGGCCAGGC CGATCAACGC CTGCGCCATG CTGCCGATCT GGTATTGGCG
CAGGCATCTG CCGGCTTGAC CGATCCATCG CGGTTGCACA AGCTGGTGAC CTGGTTCGAC
GCCGCCAACC GCACCCGCGA TCTGCTGCGC ACCACCGTCC GCGCCGACCT AGCAGTGACG
GAATTATTGC TGTCCTGGCG CGAGGGAGAG CGCCAGCCAC GTTCTAGGGG AACTCGATGA
|
|---|
| Protein sequence | MTAAFAPWQQ RAFDQTVAAL DAGRLGHGLL ICGPEGLGKR AVALALAEHV LASSPDPALA
QRTRQLIAAG THPDLQLISF VPNRTGDKLR TEIVIEQVRE ISQKLALTPH DGIAQVVIVD
PADAINRSAC NALLKTLEEP SPGRYLWLIS AQPARLPATI RSRCQRLEFK LPPAHEALAW
LLSQGVSERA AQEALDAARG HPGLAAQWLR EDGLAVRRAV AQDLEQIASG RAGAVDVAQR
WTNDGQADQR LRHAADLVLA QASAGLTDPS RLHKLVTWFD AANRTRDLLR TTVRADLAVT
ELLLSWREGE RQPRSRGTR
|
|---|
| |